PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004503061.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family ERF
Protein Properties Length: 335aa    MW: 37151.2 Da    PI: 9.5025
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004503061.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.32.6e-20158207255
             AP2   2 gykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+W+AeIrd +     + +r++lg+f tae Aa+a+++a+++++g
  XP_004503061.1 158 KYRGVRQRP-WGKWAAEIRDpF-----KaARVWLGTFETAEAAARAYDEAALRFRG 207
                     8********.**********66.....56*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.108.7E-33157216IPR001471AP2/ERF domain
SuperFamilySSF541711.24E-22158216IPR016177DNA-binding domain
PfamPF008477.1E-14158207IPR001471AP2/ERF domain
SMARTSM003803.3E-36158221IPR001471AP2/ERF domain
CDDcd000183.15E-22158217No hitNo description
PROSITE profilePS5103225.62158215IPR001471AP2/ERF domain
PRINTSPR003671.0E-11159170IPR001471AP2/ERF domain
PRINTSPR003671.0E-11181197IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 335 aa     Download sequence    Send to blast
MCMLKVANPR DKVVVKTEFN DPTLSTEMGF LFPGMNRERE MNAMISALTH IVSGDVPISG  60
SDHNHSTNIA FTPNINMSSP SSSSSNYVAS SSLKRTREDE FLHHRGIATS PALPTTTNRE  120
SSSNRTRTIA IATREMGNAV YEYRRTESIV REGEEKRKYR GVRQRPWGKW AAEIRDPFKA  180
ARVWLGTFET AEAAARAYDE AALRFRGNKA KLNFPENVTL RQLPPTTTQW NISNSPTSLV  240
SITTSTDPIV HTQPLPTSQL STNFYQHFHI HAGNVYDDDD DDKKVVMTST MASHLQPSSS  300
SSASSSIQAN SSLSSFYSTH LPPWSASSHS SSSSR
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A5e-24157218163ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004503061.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankCU0196051e-109CU019605.7 M.truncatula DNA sequence from clone MTH2-6C22 on chromosome 3, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004503061.10.0ethylene-responsive transcription factor ERF110
TrEMBLA0A1S2YD300.0A0A1S2YD30_CICAR; ethylene-responsive transcription factor ERF110
STRINGXP_004503061.10.0(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF49333254
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50080.12e-26ethylene response factor 110