PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004501207.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family bZIP
Protein Properties Length: 298aa    MW: 32656 Da    PI: 5.592
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004501207.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_145.71.4e-14129180455
                     XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55 
                      kr rrk +NR +ArrsRqRK+a ++eLe  v++L+ eN +L k+ +  +++
  XP_004501207.1 129 MKRLRRKVSNRDSARRSRQRKQAHLAELESQVEKLKLENATLYKQFSDASQQ 180
                     69****************************************9887766555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003388.7E-13125190IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.128128180IPR004827Basic-leucine zipper domain
PfamPF001702.7E-12129176IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.3E-8130165No hitNo description
SuperFamilySSF579592.09E-11130181No hitNo description
CDDcd147029.48E-23131182No hitNo description
PROSITE patternPS000360133148IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.105.1E-4166200No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0071333Biological Processcellular response to glucose stimulus
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0042803Molecular Functionprotein homodimerization activity
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 298 aa     Download sequence    Send to blast
MAATESDLDD FLNLDYELRY PTLAETEAFM TGVCSAAFQT LLPDVVASFS TCGGLTDSQN  60
LTSKHSTITA TIDSQSSIYG TVGSPVSVSA NKPNGRENHT KGTTSGSSEP SDEDDETGPC  120
EQSTNPLHMK RLRRKVSNRD SARRSRQRKQ AHLAELESQV EKLKLENATL YKQFSDASQQ  180
FHDADTNNRV LKSDVEALRA KVKLAEDMVT RSSFNTTLNN QFLHNQCQLN TPPQLNSATM  240
RRMSHVAPTI NVQQGNGISY GGEHNSNLVG FGNLDMTYND VVDNGVLSNA LSCVTIWP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1142148RRSRQRK
2142149RRSRQRKQ
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor that binds to the DNA specific sequence 5'-TGAGTCA-3' found in seed storage protein gene promoters. {ECO:0000269|PubMed:11133985}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004501207.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004501207.10.0bZIP transcription factor RISBZ4-like
SwissprotQ6H5004e-54RSBZ4_ORYSJ; bZIP transcription factor RISBZ4
TrEMBLA0A1S2Y8U70.0A0A1S2Y8U7_CICAR; bZIP transcription factor RISBZ4-like
STRINGXP_004501207.10.0(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF41953458
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G24800.18e-44basic leucine zipper 9
Publications ? help Back to Top
  1. Onodera Y,Suzuki A,Wu CY,Washida H,Takaiwa F
    A rice functional transcriptional activator, RISBZ1, responsible for endosperm-specific expression of storage protein genes through GCN4 motif.
    J. Biol. Chem., 2001. 276(17): p. 14139-52
    [PMID:11133985]
  2. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]