PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004500382.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family ERF
Protein Properties Length: 268aa    MW: 29912.4 Da    PI: 9.8999
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004500382.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.31.3e-20119169155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     s ++GVr+++ +grW AeIrdp   ++rkr++lg+f+taeeAa  ++ a+ kl+g
  XP_004500382.1 119 SVFRGVRQRP-WGRWTAEIRDP---NRRKRVWLGTFDTAEEAASVYDDAAVKLKG 169
                     689*******.**********8...335***********************9987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PIRSFPIRSF0381232.0E-757268IPR017392AP2/ERF transcription factor ERF/PTI6
PfamPF008472.4E-13119169IPR001471AP2/ERF domain
CDDcd000189.45E-32119178No hitNo description
SuperFamilySSF541717.85E-22119178IPR016177DNA-binding domain
SMARTSM003801.0E-36120183IPR001471AP2/ERF domain
PROSITE profilePS5103223.788120177IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.0E-30120178IPR001471AP2/ERF domain
PRINTSPR003671.5E-10121132IPR001471AP2/ERF domain
PRINTSPR003671.5E-10143159IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 268 aa     Download sequence    Send to blast
MSVQSTLKLQ NLKQKTPSSN FETNPSCKTA TKTKNKLLRI ILTDHDATDS DSSGDDETPK  60
NTPKLRKPKK KITHINMHFP YVFDSSTTSP SSSSCSTDPT RFKRPGKLPA GSNVARRRSV  120
FRGVRQRPWG RWTAEIRDPN RRKRVWLGTF DTAEEAASVY DDAAVKLKGS KAVVNFPNRA  180
SAKSTCNEPS KVFSGDGFAS PTSVLPFYDG DSTPFDGFRY GAVDAFGFDI DVPLSLTDVN  240
FVLTSHRFGK EKEDFSEFDL DEFMTWPS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A3e-20121179362ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
2gcc_A3e-20121182668ATERF1
3gcc_A3e-20121182668ATERF1
5wx9_A5e-20110178473Ethylene-responsive transcription factor ERF096
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004500382.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004500384.10.0pathogenesis-related genes transcriptional activator PTI6-like
RefseqXP_027190575.10.0pathogenesis-related genes transcriptional activator PTI6-like
TrEMBLA0A1S2Y7180.0A0A1S2Y718_CICAR; pathogenesis-related genes transcriptional activator PTI6-like
STRINGXP_004500382.10.0(Cicer arietinum)
STRINGXP_004500384.10.0(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF55853252
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11140.12e-22cytokinin response factor 1