PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004498391.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family ERF
Protein Properties Length: 337aa    MW: 38324.1 Da    PI: 4.902
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004498391.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.83.1e-19118168256
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkklege 56 
                     +++GVr ++ +g+W+AeIrdp         r +lg+f taeeAak+++aa+ kl+ge
  XP_004498391.1 118 KFRGVRMRP-WGKWAAEIRDP-----IarVRLWLGTFNTAEEAAKRYDAAAVKLRGE 168
                     79*******.**********8.....446**************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.107.0E-28118175IPR001471AP2/ERF domain
PfamPF008476.8E-12118168IPR001471AP2/ERF domain
SuperFamilySSF541713.99E-20118175IPR016177DNA-binding domain
SMARTSM003801.4E-34118181IPR001471AP2/ERF domain
CDDcd000181.17E-31118177No hitNo description
PROSITE profilePS5103223.037118175IPR001471AP2/ERF domain
PRINTSPR003671.0E-9119130IPR001471AP2/ERF domain
PRINTSPR003671.0E-9141157IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 337 aa     Download sequence    Send to blast
MEKSILCKKT VHETITKKFK KPKRNSNAQC SNNKISIPIK LPKVIRVTVT DPDATDSSSD  60
EEDNLWLPRR RIKRYVSQIE TETVASTTVS GKKRSERETN SKPRPAKMPA VVNGDMIKFR  120
GVRMRPWGKW AAEIRDPIAR VRLWLGTFNT AEEAAKRYDA AAVKLRGEAA VTNFAATPEK  180
EKEEKMEVVI NTEMSGSGED SGDDFRNLSS PTSVLRSRPD EICQISEPVE PVRESEPVEP  240
FEECEGETRW FDESNEFFRH EMDDVFNFAT TSDCYYSNMF FDEAPLSLFH ETTPVVVNEC  300
RLSDHVEIDK THSPSTLCQV DDFFDDILLG SDPLVVL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A4e-18112174871Ethylene-responsive transcription factor ERF096
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004498391.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004498391.10.0ethylene-responsive transcription factor CRF1-like
TrEMBLA0A1S2Y4G10.0A0A1S2Y4G1_CICAR; ethylene-responsive transcription factor CRF1-like
STRINGXP_004498391.10.0(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF45034161
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.11e-40cytokinin response factor 4