PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004497269.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family bHLH
Protein Properties Length: 317aa    MW: 35386.5 Da    PI: 4.5818
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004497269.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH37.54.2e-12238279955
                     HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                      rrRR+riN+++  L++l+P+      +K++ +++Le+AveY+k Lq
  XP_004497269.1 238 ARRRRERINERLKILQTLVPNG-----TKVDISTMLEEAVEYVKFLQ 279
                     59******************97.....8******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.485229278IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.03E-14230295IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.1E-13233291IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.5E-12235284IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.7E-9239279IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.82E-4245283No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 317 aa     Download sequence    Send to blast
MESVHLIAEE WSSLSGQYTT EESDFMSEFL AGNSNYSVCG NGNTNFGMPT SLWPTHESTI  60
LTVTETNTNG TYSFDHATNI DSLSMLFCLG DTFQCDQNLS IQINDCIDEG SGLEPVKLVL  120
ADNNNLQAKR EHEIMVSEEN ITKNIENPAK RLRSSIEVSK NMRNVSKCKK SDYVNNEEDL  180
QWNGSSNCFS QVDSNVYVEL NGGTCNSSLI PKEPQAPSLC KKSRATSGPA TDAQSIYARR  240
RRERINERLK ILQTLVPNGT KVDISTMLEE AVEYVKFLQL QIKLLSSDDM WMYAPIAYNG  300
MNIGLDLNYT SSTKGRS
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004497269.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004497269.10.0transcription factor bHLH84-like
TrEMBLA0A1S2Y1H70.0A0A1S2Y1H7_CICAR; transcription factor bHLH84-like
STRINGXP_004497269.10.0(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF80733121
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G14760.18e-42bHLH family protein