PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004493753.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family ERF
Protein Properties Length: 143aa    MW: 16458.8 Da    PI: 10.253
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004493753.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP268.41.3e-212980156
             AP2  1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkklege 56
                    s+++GVr ++ +gr++AeIrd ++    ++r +lg+f+taeeAa+a+++a+++l+g+
  XP_004493753.1 29 SHFRGVRKRP-WGRFAAEIRDpWK----KTRKWLGTFDTAEEAARAYDEAARNLRGP 80
                    78********.**********883....5*************************995 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008473.2E-142979IPR001471AP2/ERF domain
CDDcd000184.00E-312986No hitNo description
SuperFamilySSF541711.63E-222988IPR016177DNA-binding domain
PROSITE profilePS5103222.4843087IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.104.0E-313087IPR001471AP2/ERF domain
SMARTSM003801.0E-343093IPR001471AP2/ERF domain
PRINTSPR003671.6E-103142IPR001471AP2/ERF domain
PRINTSPR003671.6E-105369IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 143 aa     Download sequence    Send to blast
MPIDTFPIQA DSPAPSNHSR YAEQLPKQSH FRGVRKRPWG RFAAEIRDPW KKTRKWLGTF  60
DTAEEAARAY DEAARNLRGP RAKTNFSYVV APIIHQFPPP VYFMSGAPVR SEYKGYKLEN  120
IVVSKEEEKK PFLFDLNLPA PLL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A3e-202786262ATERF1
3gcc_A3e-202786262ATERF1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004493753.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004493753.11e-102ethylene-responsive transcription factor 8-like
TrEMBLA0A1S2XU881e-101A0A1S2XU88_CICAR; ethylene-responsive transcription factor 8-like
STRINGXP_004493753.11e-101(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF33034189
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G53170.15e-24ethylene response factor 8