PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004493333.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family bZIP
Protein Properties Length: 786aa    MW: 85893.2 Da    PI: 5.3998
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004493333.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_143.38e-14277337262
                     XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 
                     ++ kr  r+++NRe+A+ sRqRKk ++eeLeekv ++ +   +L +++     e a+l+++
  XP_004493333.1 277 EDEKRKARLMRNRESAQLSRQRKKHYVEELEEKVRSMHSTIADLSSKITFVMAENATLRQQ 337
                     6789********************************************9999999999887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.2E-16276340IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.427278338IPR004827Basic-leucine zipper domain
PfamPF001704.9E-12279338IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.63E-12280338No hitNo description
Gene3DG3DSA:1.20.5.1702.2E-17280338No hitNo description
CDDcd147046.67E-21281332No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0042538Biological Processhyperosmotic salinity response
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0005783Cellular Componentendoplasmic reticulum
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 786 aa     Download sequence    Send to blast
MADHILAVQP PEPPSSDLDF DDFSGQFNNL PIPSIDAFFN DVDTFPSDLD LPLGDFEITF  60
DDLDTLCIPS DTDDFLLPDA WNPNGLPISP LTDNHGDYNG DGDCSAKNSD YGVANFDSPE  120
SGASVVSSDQ SPDVSRFFNS ESVSADDNSV DVKISSMPSP ETESSDREES SNGPISSQGS  180
GNGGSGVYEA MNSPSPDSGR YERDISSSHK HAIVEEGVKL EGIVKGCDLK RKKENCIESA  240
ENRTPKCSRR SSSMENKTQQ QLQQQQAQSG FDGIEDEDEK RKARLMRNRE SAQLSRQRKK  300
HYVEELEEKV RSMHSTIADL SSKITFVMAE NATLRQQLGG GMMCPPPPPA GSGMYPHPPM  360
PPMPYPWMPY APYVVKPQGS QVPLVPIPRL KPQQPASSSK SKKNESKKSE VKTKKVASIS  420
LLGLFFFIML FGGLVPLVDF KFGGLVDNVS GRSSYVSDRW LYGQGGGRIW PVSGYRNESE  480
RDEELGFSNG RFGISDRNNY ERGRKLGEEM NGWKDTSCFG HRDNASEPLL ASLYVPRNDK  540
LVKIDGNLII HSIMASEKAM ASQDAQEKKV KSETGLAIPK DWDSALAIPE VGRNRGPHPN  600
VYRVSAEQRR AIGSGSAKTL KDHMKSSATD GKMQQWFREG LAGPMLSSGM CTEVFQFDVS  660
PAPGAIVPAT AVANISAENR RNATTVNKSR NRRILHTLPD PLPGSTLNIT EEHARNLPKG  720
HLPGNKSSMV VSVLVDPKEV GDGDVDGMMA PKSLTRIFVV VLIDSVKYVT YSCGLPRASP  780
LVTAYV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1680692RNATTVNKSRNRR
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004493333.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC1833710.0AC183371.2 Medicago truncatula chromosome 7 clone mth2-9g15, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004493333.10.0bZIP transcription factor 17
TrEMBLA0A1S2XRC50.0A0A1S2XRC5_CICAR; bZIP transcription factor 17
STRINGXP_004493333.10.0(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF74873448
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40950.11e-153bZIP family protein