PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_004491830.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
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Family | NAC | ||||||||
Protein Properties | Length: 363aa MW: 41007.2 Da PI: 4.9631 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 177.7 | 3.2e-55 | 20 | 144 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 p+GfrFhPtdeel+++yL kkv+ +++ + +i+evd++k+ePwdLp+ +k +e+ewyfF+ rd+ky+tg+r+nrat +gyWkatgkd+e+++ + XP_004491830.1 20 PVGFRFHPTDEELINQYLVKKVDYNSFCA-IAIAEVDMNKCEPWDLPELAKMGETEWYFFCMRDRKYPTGQRTNRATLAGYWKATGKDREIFK-E 112 89************************888.78***************8888899***************************************.9 PP NAM 97 gelvglkktLvfykgrapkgektdWvmheyrl 128 ++l+g+kktLvfykgrapkgekt+Wvmhe+rl XP_004491830.1 113 NALIGMKKTLVFYKGRAPKGEKTNWVMHEFRL 144 99****************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 1.44E-59 | 16 | 170 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 56.38 | 19 | 170 | IPR003441 | NAC domain |
Pfam | PF02365 | 2.1E-27 | 20 | 144 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 363 aa Download sequence Send to blast |
MGSMENVSVP KMEEEKFEFP VGFRFHPTDE ELINQYLVKK VDYNSFCAIA IAEVDMNKCE 60 PWDLPELAKM GETEWYFFCM RDRKYPTGQR TNRATLAGYW KATGKDREIF KENALIGMKK 120 TLVFYKGRAP KGEKTNWVMH EFRLDGINLS EQNLSKPGMG EWVICRVYEK GDYGKKVHGP 180 KLGRFDSKEG ASTTNSLLPP LMDSSLYKSE TKFTTGEFSP VNSFSIPNQT QNQKTLDDIV 240 DNNGTSILNI SCSSKAIDDY PLAEAAFAVS NQSSQVAPQI GNPQYSNCFL SQEQSMLRMQ 300 LENENLESSA KQCVKADFSV GRDFDSDISS VVFGRDILQR WFGNPELSPA STGPVVTDSL 360 WNF |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1ut4_A | 3e-52 | 16 | 170 | 14 | 165 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 3e-52 | 16 | 170 | 14 | 165 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 3e-52 | 16 | 170 | 14 | 165 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 3e-52 | 16 | 170 | 14 | 165 | NO APICAL MERISTEM PROTEIN |
3swm_A | 4e-52 | 16 | 170 | 17 | 168 | NAC domain-containing protein 19 |
3swm_B | 4e-52 | 16 | 170 | 17 | 168 | NAC domain-containing protein 19 |
3swm_C | 4e-52 | 16 | 170 | 17 | 168 | NAC domain-containing protein 19 |
3swm_D | 4e-52 | 16 | 170 | 17 | 168 | NAC domain-containing protein 19 |
3swp_A | 4e-52 | 16 | 170 | 17 | 168 | NAC domain-containing protein 19 |
3swp_B | 4e-52 | 16 | 170 | 17 | 168 | NAC domain-containing protein 19 |
3swp_C | 4e-52 | 16 | 170 | 17 | 168 | NAC domain-containing protein 19 |
3swp_D | 4e-52 | 16 | 170 | 17 | 168 | NAC domain-containing protein 19 |
4dul_A | 3e-52 | 16 | 170 | 14 | 165 | NAC domain-containing protein 19 |
4dul_B | 3e-52 | 16 | 170 | 14 | 165 | NAC domain-containing protein 19 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_004491830.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_004491830.1 | 0.0 | NAC domain-containing protein 100 isoform X1 | ||||
Refseq | XP_027188198.1 | 0.0 | NAC domain-containing protein 100 isoform X1 | ||||
TrEMBL | A0A1S2XN03 | 0.0 | A0A1S2XN03_CICAR; NAC domain-containing protein 100 isoform X1 | ||||
STRING | XP_004491830.1 | 0.0 | (Cicer arietinum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF409 | 34 | 171 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G61430.1 | 1e-101 | NAC domain containing protein 100 |