PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004490725.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family ERF
Protein Properties Length: 282aa    MW: 31691.5 Da    PI: 8.4544
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004490725.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.87.6e-20126175255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +++GVr+++ +grW+AeIrdp   ++rkr +lg+f taeeAa+ +++a+  l+g
  XP_004490725.1 126 KFRGVRQRP-WGRWAAEIRDP---NRRKRLWLGTFNTAEEAAAEYDRAAVMLKG 175
                     89*******.**********8...335*********************988776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PIRSFPIRSF0381231.1E-1011282IPR017392AP2/ERF transcription factor ERF/PTI6
SMARTSM003801.8E-35126189IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.105.6E-30126184IPR001471AP2/ERF domain
SuperFamilySSF541711.57E-21126184IPR016177DNA-binding domain
CDDcd000182.53E-30126184No hitNo description
PfamPF008471.9E-13126174IPR001471AP2/ERF domain
PROSITE profilePS5103223.472126183IPR001471AP2/ERF domain
PRINTSPR003678.7E-10127138IPR001471AP2/ERF domain
PRINTSPR003678.7E-10149165IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 282 aa     Download sequence    Send to blast
MSLQKLKKLK LETPSSNFEA DPSSKSNKKI KRKLVRIIIT DHDATDSESS GDEERERNNQ  60
ARKQRKAKRE ILHINMHPSV PDSSTISPSP SSSCSSLSRS LSEKNQKKYS RTKKPPPAAA  120
TRHHNKFRGV RQRPWGRWAA EIRDPNRRKR LWLGTFNTAE EAAAEYDRAA VMLKGTNAVT  180
NFPVMPAEVM VEAPPPVEDG GNEGGAVYSA ALASPTSVLT YDCDSTPFDG FRYGDVDAFG  240
FHIDAPLSLP EVNVTLTCNQ RLEKEEAFEE FFDLDEFMTW PY
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A3e-191241831272Ethylene-responsive transcription factor ERF096
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004490725.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004490725.10.0pathogenesis-related genes transcriptional activator PTI6-like
TrEMBLA0A1S2XM160.0A0A1S2XM16_CICAR; pathogenesis-related genes transcriptional activator PTI6-like
STRINGXP_004490725.10.0(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF55853252
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.12e-20cytokinin response factor 4