PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004490670.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family WRKY
Protein Properties Length: 834aa    MW: 95732.8 Da    PI: 6.5515
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004490670.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY62.57.2e-20683742258
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnh 58 
                     dDg++W+KYG+Ke  g ++prsYY+C       C++kk+v+r    p+++e+ Y g H +
  XP_004490670.1 683 DDGFTWKKYGKKETFGFKYPRSYYKCNDMklyACRAKKQVQRHGVHPNIFEVQYVGGHSC 742
                     8*************************9887889*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF747883.14E-76225580IPR016159Cullin repeat-like-containing domain
PfamPF030815.7E-67347585IPR004140Exocyst complex protein Exo70
SuperFamilySSF1182902.09E-18679743IPR003657WRKY domain
Gene3DG3DSA:2.20.25.802.1E-19679743IPR003657WRKY domain
SMARTSM007742.4E-23682744IPR003657WRKY domain
PROSITE profilePS5081117.58683745IPR003657WRKY domain
PfamPF031068.2E-18683742IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0006887Biological Processexocytosis
GO:0000145Cellular Componentexocyst
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 834 aa     Download sequence    Send to blast
MTPILIQIWR WLMHPKVWRF GGFASAVVGL LCYALSSSFN YLFGEWNLLK IFLYTVFSFI  60
ICLVILFARI WRHSRSLRFK AHAAYLALTI TSVYSFFFDK VMNGKPDAYS IISCAAFSIM  120
SLSLSRQTQC GFEVDLLYFF LGVLIVQLMK IKLQLFIVGA GFSYSLIILR SSFSSIDAIA  180
RADNEYSELQ NGSSVVINMN SLQLDSTDIA SNSNGINSPQ LVGSDFNSMM DQLQTCVKAL  240
EQENSNLIEM LLEQIEKYVE EDSQLVVADP NFMMDALHPE TIKSVQETAM LMVTAGFEKE  300
FSDVYNNCRR KCLDECLMHK LFRFQKFSLD EVHNMSWQDL KEEIEIWIKA SNVALKILFH  360
GERRLCDRVF FGFSSAADFS FMEVCRGSTV QLLNFADGVA NGRRSPEHLF NTLKVFETLR  420
DLIPDFESLF CDQHSVSLMN EAITIWKRLG ESIRGIFVEL ENLIVRDSAV TVPGGGLHPI  480
TQHVMNYLHA VCRFCPTLEQ VFDGSSLSGQ MNRIMDQLES NLEEKSKSYE DPSLSYIFWM  540
NNDKYIVEMT KDTKLGTLLV DFWIGKHALK KSQYHAKYQK TMGTIPPTLV QDLFQTTGPF  600
GDVQPLLYSS QQVDEIDGEN VKADVHEASP SEQQQMYFNF SQPHERYLNY RQPLERQKDS  660
WTRTIVVVSP APQFWNPDKM PPDDGFTWKK YGKKETFGFK YPRSYYKCND MKLYACRAKK  720
QVQRHGVHPN IFEVQYVGGH SCGTSLTIPS LILPPQLVNI SRDTTQSSTS PSDNAGLSIS  780
KPDIDFWKTS SSNKWPQELD SRRRWFFFPQ QWVEQNLILR SLLVITILGY GESR
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4rl5_A4e-51285584137443Exocyst complex component EXO70A1
4rl5_B4e-51285584137443Exocyst complex component EXO70A1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004490670.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004490668.10.0uncharacterized protein LOC101500706 isoform X1
TrEMBLA0A1S2XKD60.0A0A1S2XKD6_CICAR; uncharacterized protein LOC101500706 isoform X1
STRINGXP_004490668.10.0(Cicer arietinum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40740.12e-22WRKY DNA-binding protein 55