PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_004490669.1

Organism

Cicer arietinum

Taxonomic ID

3827

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer

Family

WRKY

Protein Properties

Length: 999aa MW: 114887 Da PI: 6.5765

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_004490669.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	62.2	9.1e-20	673	732	2	58
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnh 58 dDg++W+KYG+Ke g ++prsYY+C C++kk+v+r p+++e+ Y g H + XP_004490669.1 673 DDGFTWKKYGKKETFGFKYPRSYYKCNDMklyACRAKKQVQRHGVHPNIFEVQYVGGHSC 732 8***********************9887889***********************98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF74788	4.71E-76	225	580	IPR016159	Cullin repeat-like-containing domain
Pfam	PF03081	7.9E-67	347	585	IPR004140	Exocyst complex protein Exo70
SuperFamily	SSF118290	2.62E-18	669	733	IPR003657	WRKY domain
Gene3D	G3DSA:2.20.25.80	2.7E-19	669	733	IPR003657	WRKY domain
SMART	SM00774	2.4E-23	672	734	IPR003657	WRKY domain
Pfam	PF03106	1.0E-17	673	732	IPR003657	WRKY domain
PROSITE profile	PS50811	17.58	673	735	IPR003657	WRKY domain
SuperFamily	SSF74788	2.14E-31	818	992	IPR016159	Cullin repeat-like-containing domain
Pfam	PF03081	3.9E-37	819	989	IPR004140	Exocyst complex protein Exo70

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0006887	Biological Process	exocytosis
GO:0000145	Cellular Component	exocyst
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 999 aa Download sequence Send to blast
MTPILIQIWR WLMHPKVWRF GGFASAVVGL LCYALSSSFN YLFGEWNLLK IFLYTVFSFI 60 ICLVILFARI WRHSRSLRFK AHAAYLALTI TSVYSFFFDK VMNGKPDAYS IISCAAFSIM 120 SLSLSRQTQC GFEVDLLYFF LGVLIVQLMK IKLQLFIVGA GFSYSLIILR SSFSSIDAIA 180 RADNEYSELQ NGSSVVINMN SLQLDSTDIA SNSNGINSPQ LVGSDFNSMM DQLQTCVKAL 240 EQENSNLIEM LLEQIEKYVE EDSQLVVADP NFMMDALHPE TIKSVQETAM LMVTAGFEKE 300 FSDVYNNCRR KCLDECLMHK LFRFQKFSLD EVHNMSWQDL KEEIEIWIKA SNVALKILFH 360 GERRLCDRVF FGFSSAADFS FMEVCRGSTV QLLNFADGVA NGRRSPEHLF NTLKVFETLR 420 DLIPDFESLF CDQHSVSLMN EAITIWKRLG ESIRGIFVEL ENLIVRDSAV TVPGGGLHPI 480 TQHVMNYLHA VCRFCPTLEQ VFDGSSLSGQ MNRIMDQLES NLEEKSKSYE DPSLSYIFWM 540 NNDKYIVEMT KDTKLGTLLV DFWIGKHALK KSQYHAKYQK TMGTIPPTLV QDLFQTTGPF 600 GDVQPLLYSS QQVDEIDGEN VKADVHEASP SEQQQMYFNF SQPHERQKDS WTRTIVVVSP 660 APQFWNPDKM PPDDGFTWKK YGKKETFGFK YPRSYYKCND MKLYACRAKK QVQRHGVHPN 720 IFEVQYVGGH SCGTSLTIPS LILPPQLVNI SRDTTQSSTS PSDNAGLSIS KPDIDFWKTS 780 SSNKWPQGEY INSMPKLAVP ADGGHHDPMM KTIVISLVSF PSQKEKTIEL VECILASESE 840 KYVDPSLRHF FMMNSWRYLE QANKIRDLYD TFGYVWFKKT RSKVIQNLEL YQRSSWDKVL 900 EFLKLDINDS VDSMKTKLSM FNMHFKEICR VQCIWSVHDM NLREQIIATL KNILLPAYGI 960 FIGRFQDFLK NKAYDYIEYG MFDIQDILDN MFLGNKKNN

Sequence ? help Back to Top

Protein Sequence Length: 999 aa Download sequence Send to blast

MTPILIQIWR WLMHPKVWRF GGFASAVVGL LCYALSSSFN YLFGEWNLLK IFLYTVFSFI  60
ICLVILFARI WRHSRSLRFK AHAAYLALTI TSVYSFFFDK VMNGKPDAYS IISCAAFSIM  120
SLSLSRQTQC GFEVDLLYFF LGVLIVQLMK IKLQLFIVGA GFSYSLIILR SSFSSIDAIA  180
RADNEYSELQ NGSSVVINMN SLQLDSTDIA SNSNGINSPQ LVGSDFNSMM DQLQTCVKAL  240
EQENSNLIEM LLEQIEKYVE EDSQLVVADP NFMMDALHPE TIKSVQETAM LMVTAGFEKE  300
FSDVYNNCRR KCLDECLMHK LFRFQKFSLD EVHNMSWQDL KEEIEIWIKA SNVALKILFH  360
GERRLCDRVF FGFSSAADFS FMEVCRGSTV QLLNFADGVA NGRRSPEHLF NTLKVFETLR  420
DLIPDFESLF CDQHSVSLMN EAITIWKRLG ESIRGIFVEL ENLIVRDSAV TVPGGGLHPI  480
TQHVMNYLHA VCRFCPTLEQ VFDGSSLSGQ MNRIMDQLES NLEEKSKSYE DPSLSYIFWM  540
NNDKYIVEMT KDTKLGTLLV DFWIGKHALK KSQYHAKYQK TMGTIPPTLV QDLFQTTGPF  600
GDVQPLLYSS QQVDEIDGEN VKADVHEASP SEQQQMYFNF SQPHERQKDS WTRTIVVVSP  660
APQFWNPDKM PPDDGFTWKK YGKKETFGFK YPRSYYKCND MKLYACRAKK QVQRHGVHPN  720
IFEVQYVGGH SCGTSLTIPS LILPPQLVNI SRDTTQSSTS PSDNAGLSIS KPDIDFWKTS  780
SSNKWPQGEY INSMPKLAVP ADGGHHDPMM KTIVISLVSF PSQKEKTIEL VECILASESE  840
KYVDPSLRHF FMMNSWRYLE QANKIRDLYD TFGYVWFKKT RSKVIQNLEL YQRSSWDKVL  900
EFLKLDINDS VDSMKTKLSM FNMHFKEICR VQCIWSVHDM NLREQIIATL KNILLPAYGI  960
FIGRFQDFLK NKAYDYIEYG MFDIQDILDN MFLGNKKNN

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
4rl5_A	1e-50	285	998	137	561	Exocyst complex component EXO70A1
4rl5_B	1e-50	285	998	137	561	Exocyst complex component EXO70A1
Search in ModeBase

Cis-element ? help Back to Top
Source	Link
PlantRegMap	XP_004490669.1

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_004490669.1	0.0	uncharacterized protein LOC101500706 isoform X2
TrEMBL	A0A1S2XKF6	0.0	A0A1S2XKF6_CICAR; Exocyst subunit Exo70 family protein
STRING	XP_004490668.1	0.0	(Cicer arietinum)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G40740.1	1e-22	WRKY DNA-binding protein 55