PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_004490668.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
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Family | WRKY | ||||||||
Protein Properties | Length: 1009aa MW: 116221 Da PI: 6.6441 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 62.2 | 9.2e-20 | 683 | 742 | 2 | 58 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnh 58 dDg++W+KYG+Ke g ++prsYY+C C++kk+v+r p+++e+ Y g H + XP_004490668.1 683 DDGFTWKKYGKKETFGFKYPRSYYKCNDMklyACRAKKQVQRHGVHPNIFEVQYVGGHSC 742 8*************************9887889*************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF74788 | 4.81E-76 | 225 | 580 | IPR016159 | Cullin repeat-like-containing domain |
Pfam | PF03081 | 8.2E-67 | 347 | 585 | IPR004140 | Exocyst complex protein Exo70 |
SuperFamily | SSF118290 | 2.62E-18 | 679 | 743 | IPR003657 | WRKY domain |
Gene3D | G3DSA:2.20.25.80 | 2.7E-19 | 679 | 743 | IPR003657 | WRKY domain |
SMART | SM00774 | 2.4E-23 | 682 | 744 | IPR003657 | WRKY domain |
Pfam | PF03106 | 1.0E-17 | 683 | 742 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 17.58 | 683 | 745 | IPR003657 | WRKY domain |
SuperFamily | SSF74788 | 2.2E-31 | 828 | 1002 | IPR016159 | Cullin repeat-like-containing domain |
Pfam | PF03081 | 3.9E-37 | 829 | 999 | IPR004140 | Exocyst complex protein Exo70 |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0006887 | Biological Process | exocytosis | ||||
GO:0000145 | Cellular Component | exocyst | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 1009 aa Download sequence Send to blast |
MTPILIQIWR WLMHPKVWRF GGFASAVVGL LCYALSSSFN YLFGEWNLLK IFLYTVFSFI 60 ICLVILFARI WRHSRSLRFK AHAAYLALTI TSVYSFFFDK VMNGKPDAYS IISCAAFSIM 120 SLSLSRQTQC GFEVDLLYFF LGVLIVQLMK IKLQLFIVGA GFSYSLIILR SSFSSIDAIA 180 RADNEYSELQ NGSSVVINMN SLQLDSTDIA SNSNGINSPQ LVGSDFNSMM DQLQTCVKAL 240 EQENSNLIEM LLEQIEKYVE EDSQLVVADP NFMMDALHPE TIKSVQETAM LMVTAGFEKE 300 FSDVYNNCRR KCLDECLMHK LFRFQKFSLD EVHNMSWQDL KEEIEIWIKA SNVALKILFH 360 GERRLCDRVF FGFSSAADFS FMEVCRGSTV QLLNFADGVA NGRRSPEHLF NTLKVFETLR 420 DLIPDFESLF CDQHSVSLMN EAITIWKRLG ESIRGIFVEL ENLIVRDSAV TVPGGGLHPI 480 TQHVMNYLHA VCRFCPTLEQ VFDGSSLSGQ MNRIMDQLES NLEEKSKSYE DPSLSYIFWM 540 NNDKYIVEMT KDTKLGTLLV DFWIGKHALK KSQYHAKYQK TMGTIPPTLV QDLFQTTGPF 600 GDVQPLLYSS QQVDEIDGEN VKADVHEASP SEQQQMYFNF SQPHERYLNY RQPLERQKDS 660 WTRTIVVVSP APQFWNPDKM PPDDGFTWKK YGKKETFGFK YPRSYYKCND MKLYACRAKK 720 QVQRHGVHPN IFEVQYVGGH SCGTSLTIPS LILPPQLVNI SRDTTQSSTS PSDNAGLSIS 780 KPDIDFWKTS SSNKWPQGEY INSMPKLAVP ADGGHHDPMM KTIVISLVSF PSQKEKTIEL 840 VECILASESE KYVDPSLRHF FMMNSWRYLE QANKIRDLYD TFGYVWFKKT RSKVIQNLEL 900 YQRSSWDKVL EFLKLDINDS VDSMKTKLSM FNMHFKEICR VQCIWSVHDM NLREQIIATL 960 KNILLPAYGI FIGRFQDFLK NKAYDYIEYG MFDIQDILDN MFLGNKKNN |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
4rl5_A | 1e-50 | 285 | 1008 | 137 | 561 | Exocyst complex component EXO70A1 |
4rl5_B | 1e-50 | 285 | 1008 | 137 | 561 | Exocyst complex component EXO70A1 |
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Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_004490668.1 |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_004490668.1 | 0.0 | uncharacterized protein LOC101500706 isoform X1 | ||||
TrEMBL | A0A1S2XKD6 | 0.0 | A0A1S2XKD6_CICAR; uncharacterized protein LOC101500706 isoform X1 | ||||
STRING | XP_004490668.1 | 0.0 | (Cicer arietinum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF1741 | 4 | 5 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G40740.1 | 3e-22 | WRKY DNA-binding protein 55 |