PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004490521.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family WRKY
Protein Properties Length: 263aa    MW: 29573.2 Da    PI: 7.2176
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004490521.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY74.11.8e-23105165259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                      D ++WrKYGqKe+ +s+f+rsY+rC ++   gC+++k+v++++++p++ +itY g H+++
  XP_004490521.1 105 TDIHSWRKYGQKEIMNSKFTRSYFRCKHKhdeGCSATKQVQKTQDNPNMYQITYIGIHTCN 165
                     699*************************99999**************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.5E-2396165IPR003657WRKY domain
SuperFamilySSF1182901.83E-22102166IPR003657WRKY domain
SMARTSM007742.7E-31104166IPR003657WRKY domain
PROSITE profilePS5081117.35105167IPR003657WRKY domain
PfamPF031063.3E-23106164IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 263 aa     Download sequence    Send to blast
MEDNNILQSV KKRVIIKELV EGKEAATKLK YLLENENSFG NLSSDKLAAN VLSSFTKALS  60
IITQHGGENG SPVVVVAGND RKGGIRCYKR RKSAETLTMV SGTTTDIHSW RKYGQKEIMN  120
SKFTRSYFRC KHKHDEGCSA TKQVQKTQDN PNMYQITYIG IHTCNTTPKP TQLNKDISSI  180
PPYEACLVNS GIPDLKVPIS EQDHHITSPS QTINQEYPKE ETPNNVTAQK HEFMEYDENA  240
DTLSVFQSLA QEFGDIDFPF YGN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A6e-2098164268OsWRKY45
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004490521.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004490521.10.0probable WRKY transcription factor 70
TrEMBLA0A1S2XK310.0A0A1S2XK31_CICAR; probable WRKY transcription factor 70
STRINGXP_004490521.10.0(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF47003056
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.11e-37WRKY DNA-binding protein 70