PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004490322.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family bZIP
Protein Properties Length: 186aa    MW: 21611.1 Da    PI: 6.4183
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004490322.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1482.7e-1584134555
                     CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55 
                     +r rr+++NRe+ArrsR RK++ ++eL   v  L +eN+ L+++l++ ++ 
  XP_004490322.1  84 RRHRRMISNRESARRSRMRKQKHLDELWSQVVRLRTENHNLIDKLNHVSES 134
                     799*****************************************9998775 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.3E-1580144IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.94482145IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.63E-1384134No hitNo description
Gene3DG3DSA:1.20.5.1701.2E-1284157No hitNo description
PfamPF001706.8E-1384133IPR004827Basic-leucine zipper domain
CDDcd147022.47E-2085136No hitNo description
PROSITE patternPS00036087102IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 186 aa     Download sequence    Send to blast
MVPNEMRGVH NLTPENSFQI QPNYLLPQQS DIPNFHLNSL LTNLPNFHFP SAGLEFTPPS  60
CLSSNSTTSD EADELQFNVV LDERRHRRMI SNRESARRSR MRKQKHLDEL WSQVVRLRTE  120
NHNLIDKLNH VSESHDRVVQ ENAKLKEETF DLRQMVSHMQ IGNSFGCNMT DFNEVPSQLK  180
DDSVQS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
196103RRSRMRKQ
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor involved in somatic embryogenesis. Acts as positive regulator of BHLH109. {ECO:0000269|PubMed:26973252}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004490322.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004490322.11e-136basic leucine zipper 43
SwissprotQ9FMC26e-35BZP43_ARATH; Basic leucine zipper 43
TrEMBLA0A1S2XL541e-134A0A1S2XL54_CICAR; basic leucine zipper 43
STRINGXP_004490322.11e-135(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF16043399
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G30530.13e-49basic leucine-zipper 42
Publications ? help Back to Top
  1. Nowak K,Gaj MD
    Stress-related function of bHLH109 in somatic embryo induction in Arabidopsis.
    J. Plant Physiol., 2016. 193: p. 119-26
    [PMID:26973252]
  2. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]