PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004490175.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family NAC
Protein Properties Length: 370aa    MW: 42457.6 Da    PI: 7.1529
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004490175.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM64.24e-20131388128
             NAM   8 hPtdeelvveyLkkkvegkkleleevikevdiykv..ePwdLpkkvkaeek....ewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk. 95 
                     +Ptdeel + +L +k+++++l+ + +i e+d++ +  +Pw++ ++++++++    ++yfFs  +kk+at++r+ r + +g+W+   + +e+++k 
  XP_004490175.1  13 KPTDEELFQSFLYNKINNNPLPNHIAIIELDLFGTkkNPWEIWEEFATSHSycgrDLYFFSALKKKSATSSRSVRLIGKGTWEGEDTGTEIFTKd 107
                     7*********************9889*****9865449****754444333233388**************************999999999996 PP

             NAM  96 kgelvglkktLvfykgrapkgektdWvmheyrl 128
                     +++l gl+k   f k ++   +   W++hey+l
  XP_004490175.1 108 TNQLLGLRKRYRFEKSDT--VHDNGWILHEYKL 138
                     7778*********95555..4599*******98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100524.4766159IPR003441NAC domain
PfamPF023654.7E-1313138IPR003441NAC domain
SuperFamilySSF1019412.22E-2214157IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 370 aa     Download sequence    Send to blast
MALNFPSTTR IIKPTDEELF QSFLYNKINN NPLPNHIAII ELDLFGTKKN PWEIWEEFAT  60
SHSYCGRDLY FFSALKKKSA TSSRSVRLIG KGTWEGEDTG TEIFTKDTNQ LLGLRKRYRF  120
EKSDTVHDNG WILHEYKLDA SLIANPSAEN YVLCRFRKNV KKNPVSTRNR IAKNANRRLQ  180
RNNTSMGNTG RGRKRKKTVA ECEATTISGN NNNNVVVREY TIYEEPINQS NGGHNSSNDG  240
HNSSMVVKKE YEYKKGVEEE GVKNTCPNDI IVIALESSTD SGNENINQRP RSPIDSGNNK  300
TEVVKTTKEK EVDSIMNKEE DDNLNMSWPE YFAMELKMIN EGCLIQEEEY VPMLSNSFHK  360
DLILECFNMY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1192196RKRKK
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004490175.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004490175.10.0NAC domain-containing protein 101-like
TrEMBLA0A1S2XKU20.0A0A1S2XKU2_CICAR; NAC domain-containing protein 101-like
STRINGXP_004490175.10.0(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF55724133
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13180.14e-17NAC domain containing protein 83