PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004485813.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family ERF
Protein Properties Length: 220aa    MW: 24555.3 Da    PI: 9.1468
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004485813.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.11.2e-192473255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    +++GVr ++ +gr++AeIrdp   gk+ r++lg+f+taeeAa+a++ a++ ++g
  XP_004485813.1 24 HFRGVRKRP-WGRYAAEIRDP---GKKSRVWLGTFDTAEEAARAYDTAARDFRG 73
                    69*******.**********8...557**********************99887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000185.33E-312482No hitNo description
SMARTSM003802.6E-392487IPR001471AP2/ERF domain
PfamPF008475.2E-132473IPR001471AP2/ERF domain
SuperFamilySSF541713.53E-222482IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.103.5E-322481IPR001471AP2/ERF domain
PROSITE profilePS5103223.6832481IPR001471AP2/ERF domain
PRINTSPR003674.3E-112536IPR001471AP2/ERF domain
PRINTSPR003674.3E-114763IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0016020Cellular Componentmembrane
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 220 aa     Download sequence    Send to blast
MAPKDKNGGV KVNGNVNGVV KEVHFRGVRK RPWGRYAAEI RDPGKKSRVW LGTFDTAEEA  60
ARAYDTAARD FRGSKAKTNF PYPSENIKIQ STSQSSTVES SSRDRDAAAD ESYPLDLNLS  120
PAINGSVQFP FQHRFPSMPP ADKFFYYDTV VRAGMVNSRP CKGYGYDYNR PAAVSLLDVT  180
TAQSDSDSSS VIDLNHREYD YKAVRKFDLD LNHPPPMDMA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A3e-212081163ATERF1
3gcc_A3e-212081163ATERF1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtActs as a transcriptional repressor. Binds to the GCC-box pathogenesis-related promoter element. Involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways mediated by ethylene, that seems to depend on a protein kinase/phosphatase cascade, and to be influenced by methyl-jasmonate. May regulate other AtERFs (By similarity). {ECO:0000250, ECO:0000269|PubMed:10652129, ECO:0000269|PubMed:10792818, ECO:0000269|PubMed:12654868, ECO:0000269|PubMed:7756828, ECO:0000269|Ref.2}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00542DAPTransfer from AT5G44210Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004485813.1
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Strongly induced by ethephon (ethylene-releasing compound) in buds and to lower extent in leaves. Strongly induced by cycloheximide and mechanical stimuli. Wounding leads to a both local and systemical transient expression, independently of ethylene, and through a de-novo-protein-synthesis-independent regulation. Not influenced by methyl-jasmonate. Induction by purified xylanase from Trichoderma viride (TvX) and another elicitor from Phytophthora infestans (PiE), that appears to be mediated by a protein kinase cascade, and to be negatively regulated by protein phosphatases. {ECO:0000269|PubMed:10652129, ECO:0000269|PubMed:12090623, ECO:0000269|PubMed:7756828, ECO:0000269|Ref.2}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004485813.11e-163ethylene-responsive transcription factor 4
SwissprotQ404778e-52ERF4_TOBAC; Ethylene-responsive transcription factor 4
TrEMBLA0A1S2X9T01e-162A0A1S2X9T0_CICAR; ethylene-responsive transcription factor 4
STRINGXP_004485813.11e-163(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF33034189
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44210.13e-27erf domain protein 9
Publications ? help Back to Top
  1. Ogata T, et al.
    Involvement of NtERF3 in the cell death signalling pathway mediated by SIPK/WIPK and WRKY1 in tobacco plants.
    Plant Biol (Stuttg), 2015. 17(5): p. 962-72
    [PMID:25996234]