PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | CA12g05890 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
|
||||||||
Family | NAC | ||||||||
Protein Properties | Length: 155aa MW: 18037.9 Da PI: 10.1452 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 40.5 | 8.6e-13 | 8 | 118 | 3 | 127 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiyk.vePwdLpkkvkaeekewyfFskrdkkya.tgkrknratksgyWkatgkdkevlskkgel 99 +GfrFhP deel+ +yL++ v + ++ ++i+ +d+++ +ePw++ v + ek yf s+ ++ ++ t+k+++r+ g++k+++ CA12g05890 8 QGFRFHPIDEELM-KYLNNFVLHGIFPPRDFINVADLFEdSEPWEIM--VGSAEKTRYFLSRLKRLKNsTKKQSQRSD----PIRDGSKKNITI----- 94 7************.9**********999999****998626*****7..66777888999987775441455555542....356666666654..... PP NAM 100 vglkktLvfykgrapkgektdWvmheyr 127 g k +L + + ++ ++ +m+ey CA12g05890 95 -GYKSSLKYVNDIEK---DAKLLMKEYL 118 .88888888743333...4566777775 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 12.467 | 6 | 142 | IPR003441 | NAC domain |
Pfam | PF02365 | 5.7E-10 | 8 | 118 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 3.53E-13 | 8 | 140 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 155 aa Download sequence Send to blast |
MPSCKSKQGF RFHPIDEELM KYLNNFVLHG IFPPRDFINV ADLFEDSEPW EIMVGSAEKT 60 RYFLSRLKRL KNSTKKQSQR SDPIRDGSKK NITIGYKSSL KYVNDIEKDA KLLMKEYLLP 120 DHEYKKSSKD KDIYVICKIK EVKKRIKGLD GGRS* |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_016549491.1 | 1e-109 | PREDICTED: NAC domain-containing protein 78-like | ||||
TrEMBL | A0A1U8ESY0 | 1e-108 | A0A1U8ESY0_CAPAN; NAC domain-containing protein 78-like | ||||
STRING | XP_009604942.1 | 3e-31 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA1024 | 13 | 85 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G04410.1 | 2e-12 | NAC domain containing protein 2 |