PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | CA10g20530 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | NAC | ||||||||
Protein Properties | Length: 161aa MW: 18682.2 Da PI: 9.8768 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 70.5 | 4.5e-22 | 4 | 132 | 3 | 128 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLpk..kvka...eekew.yfFskrdkkyatgkrknr.atksgyWkatgkdkevl 93 G+rFhP+deel+ +yL k v+ k+ ++ + i+ d+y +Pw++ + ++ + + k++ yfF+k +kk++ g+r r ++ g Wk +k+v+ CA10g20530 4 LGIRFHPRDEELI-RYLLKFVSCKNYSC-DNIRLDDLYGNkKPWEIFEsnST-GgdgDAKNVkYFFTKLKKKKSDGRRFIRtVIGGGSWKGLDGEKSVY 99 59***********.9**********999.7899999996549****632322.2333333335******************8889************** PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 + + +lvg kk + + ++ W+m ey+l CA10g20530 100 D-GLKLVGSKKNYRYQ-YKGYQADDVVWTMREYSL 132 *.99*********996.45556679********98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 23.738 | 2 | 159 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 6.41E-22 | 4 | 154 | IPR003441 | NAC domain |
Pfam | PF02365 | 2.3E-13 | 5 | 132 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 161 aa Download sequence Send to blast |
MGLLGIRFHP RDEELIRYLL KFVSCKNYSC DNIRLDDLYG NKKPWEIFES NSTGGDGDAK 60 NVKYFFTKLK KKKSDGRRFI RTVIGGGSWK GLDGEKSVYD GLKLVGSKKN YRYQYKGYQA 120 DDVVWTMREY SLDEKILKAL RRRSLMHYED VVLCXGFNSI * |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016544549.1 | 1e-100 | PREDICTED: uncharacterized protein LOC107844702 | ||||
TrEMBL | A0A2G2VW87 | 1e-109 | A0A2G2VW87_CAPBA; Uncharacterized protein | ||||
STRING | XP_009786835.1 | 2e-60 | (Nicotiana sylvestris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA10426 | 6 | 25 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G04410.1 | 3e-11 | NAC domain containing protein 2 |