PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CA10g14950
Organism
Capsicum annuum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family WRKY
Protein Properties Length: 465aa    MW: 51570.9 Da    PI: 10.1494
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CA10g14950genomePEPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY100.69.1e-32194250360
                 -SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
        WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 
                 DgynWrKYGqK+vkgse+prsYY+Ct+ +Cpvkkkvers  d++++ei+Y+geHnh+k
  CA10g14950 194 DGYNWRKYGQKKVKGSEYPRSYYKCTHLKCPVKKKVERSY-DGQITEIVYRGEHNHPK 250
                 9***************************************.***************85 PP
2WRKY96.61.7e-30383439258
                 --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnh 58 
                 +Dg++WrKYG K+vkgs +prsYYrCts++C+v+k ver+++dp+++++tYeg+Hnh
  CA10g14950 383 EDGFRWRKYGHKVVKGSSYPRSYYRCTSPKCSVRKFVERTTDDPRAFITTYEGKHNH 439
                 7******************************************************** PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.805.8E-29183251IPR003657WRKY domain
SuperFamilySSF1182903.92E-25191251IPR003657WRKY domain
SMARTSM007747.0E-35192250IPR003657WRKY domain
PROSITE profilePS5081123.95194251IPR003657WRKY domain
PfamPF031068.8E-25194249IPR003657WRKY domain
Gene3DG3DSA:2.20.25.803.6E-31373442IPR003657WRKY domain
SuperFamilySSF1182903.92E-27377442IPR003657WRKY domain
PROSITE profilePS5081132.019377442IPR003657WRKY domain
SMARTSM007742.4E-34382441IPR003657WRKY domain
PfamPF031061.9E-24383439IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009957Biological Processepidermal cell fate specification
GO:0010214Biological Processseed coat development
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 465 aa     Download sequence    Send to blast
MEVNEAVKIP IARPVASRPR CPVYKSFSEL LTGTVDISST NVHSEMAVTA IRPKTIRLKP  60
ATNHALVGEP SSQVGVSKAP VGFGSDNILQ SVEKPKVLYK PIGKLAQRKT IPLLENKGSS  120
VSDQQRVIAD SEAHVQSANE VKQQHDPTTE SKQSLSEKSG QDKKKVRSTI VSGSTEEVAQ  180
SLINTSNVDR PSYDGYNWRK YGQKKVKGSE YPRSYYKCTH LKCPVKKKVE RSYDGQITEI  240
VYRGEHNHPK PQPPKRNLSD GHRQTAICND TSKETNNPAW GNQHPQMSEA YVCRIENQND  300
RGLTIHSSKV PCFYDPIVAA GMHTAVRNSE DSAVGSKKLK ATCDEQKSKR RKIKGPSSGA  360
GTSGESTFPY IPNQSTTDSE ITEDGFRWRK YGHKVVKGSS YPRSYYRCTS PKCSVRKFVE  420
RTTDDPRAFI TTYEGKHNHG VPNRRPNSEA SKTSSKSSAM KEKL*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A1e-27185442177Probable WRKY transcription factor 4
2lex_A1e-27185442177Probable WRKY transcription factor 4
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016543321.10.0PREDICTED: LOW QUALITY PROTEIN: WRKY transcription factor 44-like
TrEMBLA0A2G2YMF70.0A0A2G2YMF7_CAPAN; Uncharacterized protein
STRINGPGSC0003DMT4000285300.0(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA99512227
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37260.13e-86WRKY family protein