PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CA10g13720
Organism
Capsicum annuum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family NAC
Protein Properties Length: 178aa    MW: 20695.2 Da    PI: 5.6198
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CA10g13720genomePEPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM447e-1499941128
         NAM  41 kvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk.sgyWkatgkdkevlskkgelvglkktLvfy....kgrapkgektdWvmheyrl 128
                 + ePw+L     ++++  yf ++++k++++  r +r++  +g+Wk +gk ++v++ +g+l+g  k L +     ++++++  + +W+m ey l
  CA10g13720   9 DKEPWELFDG--TKNNTGYFITQHNKEKEQHVRVKRTVGiNGTWKLQGKVNKVFDDQGKLMGYVKNLKYKphphHKKSSDNPNGEWLMTEYLL 99 
                 459****633..355677******************66569****************************987765677777899*******75 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100518.8941122IPR003441NAC domain
SuperFamilySSF1019411.14E-149122IPR003441NAC domain
PfamPF023655.4E-61198IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 178 aa     Download sequence    Send to blast
MQLVNLYADK EPWELFDGTK NNTGYFITQH NKEKEQHVRV KRTVGINGTW KLQGKVNKVF  60
DDQGKLMGYV KNLKYKPHPH HKKSSDNPNG EWLMTEYLLY DRYVDPQKIK NKGFVVCKIK  120
KKEEKHGDNK QGVNNDEDAD EYIDSVLQDE EDISIINENN EYLEGDEVEE HILAILG*
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016546502.11e-126PREDICTED: NAC domain-containing protein 53-like
TrEMBLA0A2G2YD681e-126A0A2G2YD68_CAPAN; Uncharacterized protein
STRINGPGSC0003DMT4000242638e-51(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA10241385
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46770.11e-07NAC family protein