PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | CA10g04670 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | BES1 | ||||||||
Protein Properties | Length: 182aa MW: 20706.2 Da PI: 7.0178 | ||||||||
Description | BES1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF822 | 122.3 | 6.4e-38 | 36 | 119 | 4 | 89 |
DUF822 4 grkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasas 89 r p+ +Er +nk+RE RRa+a ki+aGLRa+Gnyklpk+aD n+ l ALc+eAGw vedDGt yrk + + s+++s CA10g04670 36 FRYPSDRERQKNKQREQNRRAVAHKIFAGLRAHGNYKLPKHADTNDLLMALCEEAGWHVEDDGTIYRKNPM--KDMPRLIDSTQVS 119 5899***************************************************************7543..3344444444444 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF05687 | 3.1E-34 | 37 | 108 | IPR008540 | BES1/BZR1 plant transcription factor, N-terminal |
Sequence ? help Back to Top |
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Protein Sequence Length: 182 aa Download sequence Send to blast |
MVEDNKINGV RGCIKTSRGP WLVHRTTKDG SVVTRFRYPS DRERQKNKQR EQNRRAVAHK 60 IFAGLRAHGN YKLPKHADTN DLLMALCEEA GWHVEDDGTI YRKNPMKDMP RLIDSTQVSL 120 EDQNNDGDGD YCKCEDQIKD GKYFWCDIDM AETKRTQQES SLTQLVAAEV SDVNLTLSLS 180 S* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5zd4_A | 2e-15 | 37 | 116 | 372 | 450 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_B | 2e-15 | 37 | 116 | 372 | 450 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_C | 2e-15 | 37 | 116 | 372 | 450 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_D | 2e-15 | 37 | 116 | 372 | 450 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
Search in ModeBase |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015055473.1 | 1e-94 | protein BRASSINAZOLE-RESISTANT 2-like | ||||
TrEMBL | A0A2G2YL37 | 1e-134 | A0A2G2YL37_CAPAN; Uncharacterized protein | ||||
STRING | PGSC0003DMT400091592 | 3e-96 | (Solanum tuberosum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA6204 | 21 | 30 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G36780.1 | 3e-19 | BES1/BZR1 homolog 2 |