PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CA10g00950
Organism
Capsicum annuum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family WRKY
Protein Properties Length: 768aa    MW: 83592.3 Da    PI: 7.081
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CA10g00950genomePEPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY77.12e-24327384260
                 --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 
                 +DgynWrKYGq + +g ++prsYY+C++++Cpvkk+v   + d +v+ei+Y+g Hnh+k
  CA10g00950 327 EDGYNWRKYGQNQANGRTYPRSYYKCAYPKCPVKKRVGGYH-DCQVMEIIYKGIHNHPK 384
                 8**************************************99.***************85 PP
2WRKY95.15e-30537594259
                 --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                 dDgy+WrKYGqK+vkg+++prsYY+Cts+gC+v+k+++rs  d+k v++tY g+H he
  CA10g00950 537 DDGYRWRKYGQKVVKGNPNPRSYYKCTSSGCNVRKHIQRSPYDQKSVITTYDGKHYHE 594
                 8********************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.809.2E-23321385IPR003657WRKY domain
SuperFamilySSF1182903.79E-20325385IPR003657WRKY domain
SMARTSM007741.1E-21326384IPR003657WRKY domain
PfamPF031064.5E-20327383IPR003657WRKY domain
PROSITE profilePS5081118.923327385IPR003657WRKY domain
Gene3DG3DSA:2.20.25.801.2E-33521596IPR003657WRKY domain
SuperFamilySSF1182901.7E-26528596IPR003657WRKY domain
PROSITE profilePS5081135.714531596IPR003657WRKY domain
SMARTSM007746.1E-32536595IPR003657WRKY domain
PfamPF031061.0E-22537593IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 768 aa     Download sequence    Send to blast
MGGFDDHVAI FGDWITPSPS PRAFVSSLLV DDVGGWLPLM EHTNESNCRN FNAEPQQNVT  60
ALCSTDGKDG ARAGASTDQT VKSSAPSEQK PSTRGGGLME RMVARSGFHA PRLNTDGLRP  120
PVLSQNQEAR SPYLTIPPGL SPSVLLYSPV LIYNPLVCPS PTTGLLPLAS GDESKSLMLT  180
AGIADKRKET AFGSNTSSSF SSNPVTTTLS QTHTYTYTHI ACQFPAGFHD LSQQLLPQIE  240
VSAHPNNSLQ PQSMEVTQSE QIRHGISKFP MLSTEEDFRG SHIKPEVRPF NIVGGSMQHS  300
QTLDEQKDED TKQRGGGDSK DVNPPAEDGY NWRKYGQNQA NGRTYPRSYY KCAYPKCPVK  360
KRVGGYHDCQ VMEIIYKGIH NHPKPLSNPI SALGSLNSFG DVQLDNVDPS GTGFNSELAL  420
ATSQQGPTAK GLMWSNNKLE ATSLAALHSE YCSGSTTLQS KGAQQGSADA VEVSSVFSND  480
EDDHGTRGSV LLGYDGAEDE FEPKRRKSTV SDTSGTIRAI REPRVVVHTI SEVDIIDDGY  540
RWRKYGQKVV KGNPNPRSYY KCTSSGCNVR KHIQRSPYDQ KSVITTYDGK HYHEVPPART  600
SSQGSSGASK SPSNPITTDA QSHVGRPEPT QVQNTKPAQV QNTKSTQVQN TNERYGRAPQ  660
VQNTNERYGR APQVQNTNER YGRVPSLGSA GPISGFDSFG TNEQQDLSSL NQHQFSVPLN  720
PYIGWQRPVN DAGFVLPEGE AMPDPNLNYS NGSSTYQKIM NGLPPQM*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A2e-30527596877Probable WRKY transcription factor 4
2lex_A2e-30527596877Probable WRKY transcription factor 4
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016544086.10.0PREDICTED: probable WRKY transcription factor 2
TrEMBLA0A2G2YII80.0A0A2G2YII8_CAPAN; Uncharacterized protein
STRINGPGSC0003DMT4000293280.0(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA37112341
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56270.13e-87WRKY DNA-binding protein 2