PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | CA09g00160 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | NAC | ||||||||
Protein Properties | Length: 162aa MW: 18655.1 Da PI: 9.8334 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 135.5 | 3.6e-42 | 11 | 144 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk.leleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 l+pG+rF Pt+eelv +yL++k+egk+ ++++vi+ ++iy+++P++Lp+ +k+++++w+fF++ + ++a+g r++r t++gyWkatg+ v+s CA09g00160 11 LTPGYRFYPTEEELVGFYLRNKLEGKRvDDIQRVIPVINIYQYNPSQLPEmageVIKHDSEQWFFFIPIQDREARGGRPTRLTTHGYWKATGTPGYVYS 109 579************************5556778**************9546766666888********************99***************9 PP NAM 95 k.kgelvglkktLvfykgrapkgektdWvmheyrl 128 + +++ +g k+t+vfykgrap+g+kt+W m+ey++ CA09g00160 110 SsNNRIIGGKRTMVFYKGRAPNGKKTQWKMNEYKA 144 877888***************************86 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 6.28E-45 | 4 | 151 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 43.02 | 11 | 161 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.1E-21 | 13 | 143 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 162 aa Download sequence Send to blast |
MENITYANNV LTPGYRFYPT EEELVGFYLR NKLEGKRVDD IQRVIPVINI YQYNPSQLPE 60 MAGEVIKHDS EQWFFFIPIQ DREARGGRPT RLTTHGYWKA TGTPGYVYSS SNNRIIGGKR 120 TMVFYKGRAP NGKKTQWKMN EYKATTDDDG KVSFPTLKNN N* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 5e-27 | 11 | 143 | 15 | 139 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016541520.1 | 1e-109 | PREDICTED: NAC domain-containing protein 90-like | ||||
Swissprot | Q9FMR3 | 2e-61 | NAC90_ARATH; NAC domain-containing protein 90 | ||||
TrEMBL | A0A1U8EDX2 | 1e-108 | A0A1U8EDX2_CAPAN; NAC domain-containing protein 90-like | ||||
STRING | Solyc09g010160.1.1 | 5e-85 | (Solanum lycopersicum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA2494 | 23 | 57 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G22380.1 | 9e-64 | NAC domain containing protein 90 |
Publications ? help Back to Top | |||
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