PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CA06g22720
Organism
Capsicum annuum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family TALE
Protein Properties Length: 695aa    MW: 77529.5 Da    PI: 7.8065
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CA06g22720genomePEPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox28.72.3e-094124491954
                 HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
    Homeobox  19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                 Fe   ++yp+ +++  LAk++gLt +qV++WF N R +
  CA06g22720 412 FEHflHPYPKDSDKIMLAKQTGLTRSQVSNWFINARVR 449
                 554459******************************88 PP
2BELL1215.2e-39276347172
        BELL   1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 
                 +rqelq+kkakL+++leeV++rY+qy++q+q+++ssFe+vag+gsak+Yt+lAl+aiS++FrcLkdaiaeqi
  CA06g22720 276 QRQELQMKKAKLVTMLEEVEQRYRQYHHQMQIIVSSFEQVAGIGSAKSYTQLALHAISKQFRCLKDAIAEQI 347
                 69*********************************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM005742.3E-59199345IPR006563POX domain
PfamPF075263.0E-48204344IPR006563POX domain
PROSITE profilePS5007112.05390453IPR001356Homeobox domain
SMARTSM003894.2E-10393457IPR001356Homeobox domain
CDDcd000864.47E-12393454No hitNo description
SuperFamilySSF466895.13E-17394459IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.606.0E-29396459IPR009057Homeodomain-like
PfamPF059202.7E-18410449IPR008422Homeobox KN domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 695 aa     Download sequence    Send to blast
MYYGGTSDNN IQADQHHHAN NNIQTLYLMN PNSYMQGYNT TTDTQQQQQQ LLFLNSSPAG  60
NNALNPGNIP HAPLQHQQHF VGVPLPAVSL HDQINHHGLI QRLWNNQSGS RHHHHESHQV  120
IPSSMVVSTT TDLASQLGFQ RPIVVSPTPQ HRQQQQQQQQ GGLSLSLSPQ QQQQISFNNI  180
SSTSSPRTNS VTIRGSLDGG SSNMVLGSKY LKAAQELLDE VVNIVGKSIK RNDHQKKEEN  240
SMNKESMPLT SDVNTSSGTG SSRPKNEVAA ELTTAQRQEL QMKKAKLVTM LEEVEQRYRQ  300
YHHQMQIIVS SFEQVAGIGS AKSYTQLALH AISKQFRCLK DAIAEQIKAT SKSLGEEEGI  360
GGKIEGSRLK FVDHHLRQQR ALQQLGMMQP NAWRPQRGLP ERAVSVLRAW LFEHFLHPYP  420
KDSDKIMLAK QTGLTRSQVS NWFINARVRL WKPMVEEMYL EEVKNQEQNS TTSQDDKNKE  480
NNTMVSKSIA PHEEKQPITT SLLQDGTEIS TSTISTSPTV DAASLQAQHA HNFSFLGTFN  540
MENTTTNTTA VVDHMENNAK KPRNDMQKYS PSSILSSVDM EAKARESSNK GFNNPLMAAY  600
AMGDFGRFDP HEQMTANFHG NGVSLTLGLP PSENLAMPVS QQNYLSNQNI DMGSRPEMGS  660
HYNRMGYESI DFQSGNKRFP TQLLPDFVTG NLGT*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3k2a_A6e-16399457563Homeobox protein Meis2
3k2a_B6e-16399457563Homeobox protein Meis2
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016577965.10.0PREDICTED: BEL1-like homeodomain protein 1
TrEMBLA0A2G2ZDB50.0A0A2G2ZDB5_CAPAN; BEL1-like homeodomain protein 6
STRINGSolyc06g074120.2.10.0(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA14782467
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35940.32e-97BEL1-like homeodomain 1