PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CA06g13020
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 169aa    MW: 19300.1 Da    PI: 4.9004
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CA06g13020genomePEPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP227.29.8e-0914481855
         AP2 18 eIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                eIr+p+    r kr++lg+++t+eeAak  ++a  kl+g
  CA06g13020 14 EIREPT----RgKRVWLGTYDTPEEAAKVFDKATVKLKG 48
                688873....35******************999888876 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103214.289156IPR001471AP2/ERF domain
SMARTSM003803.5E-11762IPR001471AP2/ERF domain
CDDcd000181.43E-171355No hitNo description
Gene3DG3DSA:3.30.730.106.3E-161455IPR001471AP2/ERF domain
SuperFamilySSF541713.73E-111456IPR016177DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 169 aa     Download sequence    Send to blast
MVMTTKEHED GDGEIREPTR GKRVWLGTYD TPEEAAKVFD KATVKLKGSD AITNFLRILT  60
MELTVMETES VTDCGEKSDD VVVLSPTSVL VNGDLTPFDN FRFCEVDDFD FDVDLFFQLP  120
EFGMWRNTTA KSPASITLMI LPLKLGSRHR VYSRKYFFNF LCLIKKRY*
Functional Description ? help Back to Top
Source Description
UniProtActs as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. Activates the defense genes of plants. {ECO:0000269|PubMed:11971137}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016577598.16e-52PREDICTED: pathogenesis-related genes transcriptional activator PTI6-like
SwissprotO046822e-38PTI6_SOLLC; Pathogenesis-related genes transcriptional activator PTI6
TrEMBLA0A2G2ZAE71e-120A0A2G2ZAE7_CAPAN; Uncharacterized protein
STRINGXP_009607079.11e-46(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA52272137
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.12e-13cytokinin response factor 4