PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

CA05g09910

Organism

Capsicum annuum

Taxonomic ID

4072

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

SAP

Protein Properties

Length: 222aa MW: 25925.3 Da PI: 6.6994

Description

SAP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
CA05g09910	genome	PEP	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SAP	303	7.3e-93	1	184	79	264
SAP 79 vcstwravsrsdllwqrltrriWrrtkllrdtWreeyiyrhrtarnfrtrrysyvtlqfdpadvdedndadalsCrclalsdkylaaGfadGavrlfdl 177 vcstw+avs sdllwq+ltr+iW+r +llr+tWreeyiy+h+ta+nf + ry y tl+f p ++++d+++++lsCr+l lsd +la+Gf+dG+v+lf l CA05g09910 1 VCSTWQAVSHSDLLWQNLTRQIWNRHELLRQTWREEYIYWHQTANNFLHHRYIYNTLHFMPENNEDDENNNSLSCRRLQLSDYHLAVGFSDGSVQLFFL 99 8************************************************************************************************ PP SAP 178 etrlhvstflpqhrdrlGrfsravsGivisdsrlvfatldGdihvavidgagaaaarrallGdvvndGalvdfaGsgrWwvGlyaGv 264 rlh+stf+p+hrdrlGrfsravsGi++sd +lvfa+ldGdihv +i aa +rra++GdvvndGalvdf+Gs++WwvGlyaG+ CA05g09910 100 PRRLHLSTFHPHHRDRLGRFSRAVSGIILSDVQLVFASLDGDIHVVAIGD--AALPRRAHFGDVVNDGALVDFTGSDQWWVGLYAGI 184 *******************************************998..789*****************************7 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF81383	3.49E-5	1	50	IPR001810	F-box domain
Gene3D	G3DSA:1.20.1280.50	8.1E-5	1	75	No hit	No description
SuperFamily	SSF50978	1.31E-5	68	215	IPR017986	WD40-repeat-containing domain
Gene3D	G3DSA:2.130.10.10	5.6E-4	76	149	IPR015943	WD40/YVTN repeat-like-containing domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0005515	Molecular Function	protein binding

Sequence ? help Back to Top
Protein Sequence Length: 222 aa Download sequence Send to blast
VCSTWQAVSH SDLLWQNLTR QIWNRHELLR QTWREEYIYW HQTANNFLHH RYIYNTLHFM 60 PENNEDDENN NSLSCRRLQL SDYHLAVGFS DGSVQLFFLP RRLHLSTFHP HHRDRLGRFS 120 RAVSGIILSD VQLVFASLDG DIHVVAIGDA ALPRRAHFGD VVNDGALVDF TGSDQWWVGL 180 YAGIILFLNC LILKNVFKRV RVLQVDFDPF DDNTVIYLWM C*

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional regulator involved in the specification of floral identity. Acts as A class cadastral protein by repressing the C class floral homeotic gene AGAMOUS in the external flower organs in association with APETALA2 and other repressors. Is required to maintain floral meristem identity in concert with AGAMOUS. Interacts also with APETALA2 to ensure the normal development of ovule.

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	HG975444	2e-99	HG975444.1 Solanum pennellii chromosome ch05, complete genome.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_016574645.1	1e-132	PREDICTED: transcriptional regulator STERILE APETALA isoform X1
Swissprot	Q9FKH1	3e-66	SAP_ARATH; Transcriptional regulator STERILE APETALA
TrEMBL	A0A1U8GU38	1e-131	A0A1U8GU38_CAPAN; Transcriptional regulator STERILE APETALA
TrEMBL	A0A2G2WSJ9	1e-131	A0A2G2WSJ9_CAPBA; Transcriptional regulator STERILE APETALA
TrEMBL	A0A2G2ZI71	1e-131	A0A2G2ZI71_CAPAN; transcriptional regulator STERILE APETALA isoform X1
STRING	Solyc05g041220.1.1	1e-109	(Solanum lycopersicum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA4099	23	45

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G35770.1	1e-66	SAP family protein

Publications ? help Back to Top
Li N, et al. STERILE APETALA modulates the stability of a repressor protein complex to control organ size in Arabidopsis thaliana. PLoS Genet., 2018. 14(2): p. e1007218 [PMID:29401459]