PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

CA05g09900

Organism

Capsicum annuum

Taxonomic ID

4072

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

SAP

Protein Properties

Length: 164aa MW: 18126.7 Da PI: 6.7563

Description

SAP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
CA05g09900	genome	PEP	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SAP	249.9	9.3e-77	1	163	293	455
SAP 293 mGWhmlteltelvGrvrvteretavaCtslrlvvfdlrnqgvvlreeeerrGlivssldasneayvvvdsrGvatvrrvenleevcrfrvrg.aqrgvl 390 mGWh+ltelte+vGr+rvt retavaCtsl+l+++dlrnqg+++r + +rrGliv+s+da ne++v+vdsrG+a+vrr+++lee+crf+vrg qrgv+ CA05g09900 1 MGWHILTELTEMVGRIRVTTRETAVACTSLQLMAIDLRNQGIIIRAQPSRRGLIVASFDARNETLVAVDSRGMASVRRADDLEEICRFNVRGdNQRGVV 99 8************************************************************************************************ PP SAP 391 gCvnggyalvyaggvlrvWeiekkegylyslrervgevnalvaddrhvavsssdgtihlldfgaq 455 gC+nggyal+++g+v+rvW+ie+ + lyslrer+g+ na++ad+r+va++ssd+tihl+dfgaq CA05g09900 100 GCMNGGYALMWIGSVIRVWDIEHGA-CLYSLRERIGNNNAIIADERYVAACSSDATIHLWDFGAQ 163 *******************77.9**********************************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:2.130.10.10	7.9E-10	21	160	IPR015943	WD40/YVTN repeat-like-containing domain
SuperFamily	SSF50998	5.1E-11	22	161	IPR011047	Quinoprotein alcohol dehydrogenase-like superfamily
PROSITE profile	PS50294	9.046	115	163	IPR017986	WD40-repeat-containing domain
PROSITE profile	PS50082	8.57	142	163	IPR001680	WD40 repeat
PROSITE pattern	PS00678	0	146	160	IPR019775	WD40 repeat, conserved site

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0005515	Molecular Function	protein binding

Sequence ? help Back to Top
Protein Sequence Length: 164 aa Download sequence Send to blast
MGWHILTELT EMVGRIRVTT RETAVACTSL QLMAIDLRNQ GIIIRAQPSR RGLIVASFDA 60 RNETLVAVDS RGMASVRRAD DLEEICRFNV RGDNQRGVVG CMNGGYALMW IGSVIRVWDI 120 EHGACLYSLR ERIGNNNAII ADERYVAACS SDATIHLWDF GAQ*

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional regulator involved in the specification of floral identity. Acts as A class cadastral protein by repressing the C class floral homeotic gene AGAMOUS in the external flower organs in association with APETALA2 and other repressors. Is required to maintain floral meristem identity in concert with AGAMOUS. Interacts also with APETALA2 to ensure the normal development of ovule.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_016574645.1	1e-112	PREDICTED: transcriptional regulator STERILE APETALA isoform X1
Refseq	XP_016574646.1	1e-113	PREDICTED: transcriptional regulator STERILE APETALA isoform X2
Swissprot	Q9FKH1	6e-54	SAP_ARATH; Transcriptional regulator STERILE APETALA
TrEMBL	A0A1U8GTR5	1e-111	A0A1U8GTR5_CAPAN; transcriptional regulator STERILE APETALA isoform X2
TrEMBL	A0A1U8GU38	1e-111	A0A1U8GU38_CAPAN; Transcriptional regulator STERILE APETALA
TrEMBL	A0A2G2ZI71	1e-111	A0A2G2ZI71_CAPAN; transcriptional regulator STERILE APETALA isoform X1
TrEMBL	A0A2G3CFU7	1e-111	A0A2G3CFU7_CAPCH; Transcriptional regulator STERILE APETALA
STRING	XP_009596786.1	5e-97	(Nicotiana tomentosiformis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA21819	2	2

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G35770.1	2e-56	SAP family protein

Publications ? help Back to Top
Li N, et al. STERILE APETALA modulates the stability of a repressor protein complex to control organ size in Arabidopsis thaliana. PLoS Genet., 2018. 14(2): p. e1007218 [PMID:29401459]