PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CA04g21480
Organism
Capsicum annuum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bZIP
Protein Properties Length: 164aa    MW: 18925.8 Da    PI: 5.765
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CA04g21480genomePEPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_145.61.5e-142785563
                CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1  5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
                ++ +r+q+NRe+ArrsR RK++ ++ L   v +L++eN+   + ++  +++++++++e+
  CA04g21480 27 RKRKRMQSNRESARRSRMRKQKHLDDLNGQVTQLKNENSNILNSINVTTQQYSNVEAEN 85
                5789**********************************************999999887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003387.2E-192387IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.2E-102577No hitNo description
PROSITE profilePS5021711.1852588IPR004827Basic-leucine zipper domain
PfamPF001701.4E-112785IPR004827Basic-leucine zipper domain
SuperFamilySSF579599.14E-132779No hitNo description
CDDcd147021.13E-192879No hitNo description
PROSITE patternPS0003603045IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009845Biological Processseed germination
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 164 aa     Download sequence    Send to blast
MATSSGNSSQ IQTNSGSEEV LMVVDERKRK RMQSNRESAR RSRMRKQKHL DDLNGQVTQL  60
KNENSNILNS INVTTQQYSN VEAENSVLRA QMMELTQRLQ SLNEILNYID NNNNNNNINN  120
NNNNNNGGFE INNYHQDDFQ INPWNMMYVN QPIMASADML YQY*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12647RKRKRMQSNRESARRSRMRKQK
23946RRSRMRKQ
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that binds to the DNA G-box motif 5'-CACGTG-3' of MAN7 promoter. Involved in the positive regulation of seed germination through MAN7 gene activation. MAN7 is required for both, loosening of the micropylar endosperm, and rupture of the seed coat in germinating seeds. {ECO:0000269|PubMed:23461773}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00239DAPTransfer from AT1G75390Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016568511.13e-99PREDICTED: bZIP transcription factor 53-like
SwissprotC0Z2L51e-49BZP44_ARATH; bZIP transcription factor 44
TrEMBLA0A2G2ZS891e-112A0A2G2ZS89_CAPAN; Uncharacterized protein
STRINGSolyc04g080740.1.15e-79(Solanum lycopersicum)
STRINGPGSC0003DMT4000094937e-79(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA53724123
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75390.12e-41basic leucine-zipper 44
Publications ? help Back to Top
  1. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]
  2. Pedrotti L, et al.
    Snf1-RELATED KINASE1-Controlled C/S1-bZIP Signaling Activates Alternative Mitochondrial Metabolic Pathways to Ensure Plant Survival in Extended Darkness.
    Plant Cell, 2018. 30(2): p. 495-509
    [PMID:29348240]