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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
CA03g24270 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family |
GRAS |
Protein Properties |
Length: 387aa MW: 43306 Da PI: 8.4812 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
CA03g24270 | genome | PEP | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 378.6 | 7.5e-116 | 13 | 385 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlar.svselykalppsetsekn..sseelaalklfsevsPilkfshl 96
lv+lL++cAeav+ +d+++a+ lL++l+ a g+++qR+a++f+++La rla + +++ +++ + ++++ +++ al+l++e++P ++f+h+
CA03g24270 13 LVQLLITCAEAVACRDKSRASVLLSELRSSALVFGTSFQRVASCFMQGLADRLALvQPLGMVGYVASPAMNKTDiaLEKKEEALRLLYEMCPHIQFGHF 111
689***************************************************944445655555555555556788889999*************** PP
GRAS 97 taNqaIleavegeervHiiDfdis....qGlQWpaLlqaLasRpegpp.slRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledle 190
+aN+ Ilea+ege+ +H++D+++s +G QW L+q+La+Rp+ pp +lRiT+vg+ + e+ + +g+ L+ +A++lg+++ef++ v+++le+l+
CA03g24270 112 VANSLILEAFEGESFIHVVDLGMSlglpHGHQWRRLIQSLANRPGHPPrRLRITAVGQ----NIEKFQVIGDELEAYARSLGISLEFSA-VESNLENLK 205
********************99874444678*************877779********....99*************************.79******* PP
GRAS 191 leeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErel 289
+++++ gE+l+Vn++lqlh +++es + +vL++v +lsP+++v+veq+++hn++ Fl rf+eal+yysa+fdsl++ lp+ + +r+k+E+++
CA03g24270 206 PKDIKAYDGEVLVVNSILQLHCVVKESRGALN---SVLQVVHELSPRILVLVEQDSSHNGPFFLGRFMEALHYYSAIFDSLDVMLPKYDTKRAKIEQFY 301
************************88877777...8*************************************************************** PP
GRAS 290 lgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
+++ei+n+v+ceg +r+erhe++ +Wr+r+++aGF+++p++ +a qak l+kv+ +g+++ ee+g+lvlgW ++p+v++S+W+
CA03g24270 302 FAEEIKNIVSCEGPARVERHERVDQWRRRMSRAGFQAAPIK--MAPQAKQWLAKVNgHEGFTITEEKGCLVLGWTSKPIVAASCWK 385
***************************************96..688**********9****************************8 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 387 aa
Download sequence Send
to blast |
MRRKQXNGEA VKLVQLLITC AEAVACRDKS RASVLLSELR SSALVFGTSF QRVASCFMQG 60 LADRLALVQP LGMVGYVASP AMNKTDIALE KKEEALRLLY EMCPHIQFGH FVANSLILEA 120 FEGESFIHVV DLGMSLGLPH GHQWRRLIQS LANRPGHPPR RLRITAVGQN IEKFQVIGDE 180 LEAYARSLGI SLEFSAVESN LENLKPKDIK AYDGEVLVVN SILQLHCVVK ESRGALNSVL 240 QVVHELSPRI LVLVEQDSSH NGPFFLGRFM EALHYYSAIF DSLDVMLPKY DTKRAKIEQF 300 YFAEEIKNIV SCEGPARVER HERVDQWRRR MSRAGFQAAP IKMAPQAKQW LAKVNGHEGF 360 TITEEKGCLV LGWTSKPIVA ASCWKC*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | HG975515 | 0.0 | HG975515.1 Solanum lycopersicum chromosome ch03, complete genome. |