PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | CA02g07070 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | GeBP | ||||||||
Protein Properties | Length: 286aa MW: 32422.9 Da PI: 8.6923 | ||||||||
Description | GeBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF573 | 58.6 | 1.7e-18 | 105 | 193 | 5 | 97 |
DUF573 5 rlwseeDeivlLqGlidfkaktgkspsd.didafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97 + ws+eDei++L+Gl+ k++++ ++++ d a+ye +k+ ++ + ++l +K++ L++K+kk+ kk ++ s +h+++ f+ls k+Wg CA02g07070 105 SSWSKEDEITILKGLVRLKTENEIKSKKiDYIALYESIKQFLHRESDIEDLKKKVKCLREKYKKNLKK-----AKTPSVPHEEELFHLSDKFWG 193 57*********************987777***************************************.....3445669999**********8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04504 | 9.9E-17 | 105 | 193 | IPR007592 | Protein of unknown function DUF573 |
Pfam | PF10545 | 4.8E-5 | 138 | 177 | IPR006578 | MADF domain |
Sequence ? help Back to Top |
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Protein Sequence Length: 286 aa Download sequence Send to blast |
SDTPCLVQSE DQMLRRAKQP PNKNKKKRCR GNDYDDVIKE ERKGKHVHLM PSLDDNYGDS 60 KEPEKKSTYA NTSMPDTDCG LGLCDQSGVL PEGLIKEKTG SSLSSSWSKE DEITILKGLV 120 RLKTENEIKS KKIDYIALYE SIKQFLHRES DIEDLKKKVK CLREKYKKNL KKAKTPSVPH 180 EEELFHLSDK FWGDGDKDHE INQQITCHSS APSCSSIRPY KSLDLEASDK IFVGDLGLAL 240 ATINRNQSNP VHVALEQYKL VSQSLRIRKC YGNQILEARI TPKMV* |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016564018.1 | 0.0 | PREDICTED: uncharacterized protein LOC107862842 isoform X1 | ||||
Refseq | XP_016564019.1 | 0.0 | PREDICTED: uncharacterized protein LOC107862842 isoform X1 | ||||
Refseq | XP_016564020.1 | 0.0 | PREDICTED: uncharacterized protein LOC107862842 isoform X1 | ||||
Refseq | XP_016564021.1 | 0.0 | PREDICTED: uncharacterized protein LOC107862842 isoform X1 | ||||
TrEMBL | A0A2G3A4Z8 | 0.0 | A0A2G3A4Z8_CAPAN; Peptidylprolyl isomerase | ||||
STRING | Solyc02g005290.2.1 | 6e-47 | (Solanum lycopersicum) | ||||
STRING | PGSC0003DMT400037664 | 2e-48 | (Solanum tuberosum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA13760 | 7 | 8 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G11510.1 | 6e-06 | DNA-binding storekeeper protein-related transcriptional regulator |