PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | CA01g10630 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | EIL | ||||||||
Protein Properties | Length: 240aa MW: 26780 Da PI: 8.9591 | ||||||||
Description | EIL family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | EIN3 | 275.3 | 2.5e-84 | 60 | 230 | 1 | 176 |
XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS EIN3 1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLraWWkekv 99 eel++rmwkd ++lkrlke++k ++++a +++k++++ ++qarrkkmsraQDgiLkYMlk mevcna+GfvYgiipekgkpv+g+sd++raWWkekv CA01g10630 60 EELERRMWKDHIKLKRLKEKQKL--AARQA-AKKKENKQVTDQARRKKMSRAQDGILKYMLKLMEVCNARGFVYGIIPEKGKPVSGSSDNVRAWWKEKV 155 8*****************99996..44555.889999************************************************************** PP XXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S CS EIN3 100 efdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtG 176 +fd+ngpaai+ky+a++l+ +++ ++ ++ + ++ l++lqD+tlgSLLs+lmqhcdppqr++ple+gv+pPWWP CA01g10630 156 KFDKNGPAAIAKYEAECLARGEGVGS--QNGNLQSVLQDLQDATLGSLLSSLMQHCDPPQRKYPLERGVSPPWWPXX 230 *******************9988888..679999*****************************************75 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04873 | 1.4E-87 | 60 | 234 | No hit | No description |
Gene3D | G3DSA:1.10.3180.10 | 2.9E-22 | 183 | 229 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
SuperFamily | SSF116768 | 1.7E-19 | 187 | 229 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 240 aa Download sequence Send to blast |
MSFLCFANVS LLLSVASLVD RVPVPVLVGG NRNSSDIEVD DIRCDNLDEK DVSDEEIEPE 60 ELERRMWKDH IKLKRLKEKQ KLAARQAAKK KENKQVTDQA RRKKMSRAQD GILKYMLKLM 120 EVCNARGFVY GIIPEKGKPV SGSSDNVRAW WKEKVKFDKN GPAAIAKYEA ECLARGEGVG 180 SQNGNLQSVL QDLQDATLGS LLSSLMQHCD PPQRKYPLER GVSPPWWPXX XATMVANGG* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1wij_A | 1e-20 | 187 | 228 | 9 | 50 | ETHYLENE-INSENSITIVE3-like 3 protein |
Search in ModeBase |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 88 | 103 | KKKENKQVTDQARRKK |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor that may be involved in the ethylene response pathway. {ECO:0000269|PubMed:9215635, ECO:0000269|PubMed:9851977}. |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | HG975513 | 0.0 | HG975513.1 Solanum lycopersicum chromosome ch01, complete genome. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016576629.1 | 1e-140 | PREDICTED: ETHYLENE INSENSITIVE 3-like 3 protein isoform X1 | ||||
Swissprot | O23116 | 2e-99 | EIL3_ARATH; ETHYLENE INSENSITIVE 3-like 3 protein | ||||
TrEMBL | A0A2G3AHB5 | 1e-172 | A0A2G3AHB5_CAPAN; ETHYLENE INSENSITIVE 3-like 1 protein | ||||
STRING | PGSC0003DMT400076890 | 1e-125 | (Solanum tuberosum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA304 | 23 | 178 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G73730.1 | 1e-89 | ETHYLENE-INSENSITIVE3-like 3 |
Publications ? help Back to Top | |||
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