PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Bv9_218740_uhux.t1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta
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Family | B3 | ||||||||
Protein Properties | Length: 251aa MW: 29060 Da PI: 8.9405 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 56 | 7.2e-18 | 132 | 221 | 1 | 98 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 f+k +++s+v+ +l++p +f++++ + e+ + tl desg +W+ k+ rk++ l++GW++F +++L +gD +vF+l++ s f Bv9_218740_uhux.t1 132 FVKPMLQSHVTGGFWLSFPLPFCKTYLPD--EDEMFTLIDESGDEWQSKYLARKNG----LSGGWRGFSIDHELVDGDALVFQLIEPSIF- 215 89************************534..44589**************767776....************************988888. PP .EEEEE- CS B3 92 lvvkvfr 98 +v ++r Bv9_218740_uhux.t1 216 -KVYIIR 221 .777776 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.40.330.10 | 2.8E-21 | 124 | 222 | IPR015300 | DNA-binding pseudobarrel domain |
SuperFamily | SSF101936 | 6.54E-26 | 125 | 223 | IPR015300 | DNA-binding pseudobarrel domain |
CDD | cd10017 | 1.98E-25 | 130 | 221 | No hit | No description |
PROSITE profile | PS50863 | 13.112 | 132 | 223 | IPR003340 | B3 DNA binding domain |
SMART | SM01019 | 4.6E-25 | 132 | 223 | IPR003340 | B3 DNA binding domain |
Pfam | PF02362 | 1.6E-15 | 132 | 221 | IPR003340 | B3 DNA binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 251 aa Download sequence Send to blast |
MVTTAANYEE KRKQRLEENK KRMEQLNLHK LSQALKPSPT KNIKQSPAKK IKCRLDDLGV 60 HFPIRRSSRM ADKPPPNYKE NAVEPFREGR RVFSYKRRDL LNRVYASDEH RLYAIDRAEK 120 LESSLGSEFP AFVKPMLQSH VTGGFWLSFP LPFCKTYLPD EDEMFTLIDE SGDEWQSKYL 180 ARKNGLSGGW RGFSIDHELV DGDALVFQLI EPSIFKVYII RVNSLEEDEE ESSDENVKAA 240 VSEGKKDSRK K |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010691035.1 | 0.0 | PREDICTED: B3 domain-containing protein At3g19184 | ||||
Swissprot | Q1G3M3 | 2e-84 | Y3918_ARATH; B3 domain-containing protein At3g19184 | ||||
TrEMBL | A0A0K9RS36 | 1e-123 | A0A0K9RS36_SPIOL; Uncharacterized protein | ||||
STRING | XP_010691035.1 | 0.0 | (Beta vulgaris) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G19184.1 | 1e-85 | B3 family protein |
Publications ? help Back to Top | |||
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