PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Bv7_170120_ospm.t1

Organism

Beta vulgaris

Taxonomic ID

161934

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta

Family

Trihelix

Protein Properties

Length: 868aa MW: 98185.8 Da PI: 7.5716

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Bv7_170120_ospm.t1	genome	TBVR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	25.4	3.7e-08	93	150	18	75
trihelix 18 eerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtses 75 + + +rgk ++ + +ev++++ ++g+ r +k+ kw+n+ ++++k+ e+e++ + + Bv7_170120_ospm.t1 93 DVEKGRGKNRADKDREVAEFLNKHGVYRDAKTAATKWDNMLGEFRKVYEWERGSERLQ 150 55556788999999*************************************9865444 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00220	0.0086	621	853	IPR000719	Protein kinase domain
CDD	cd00180	2.45E-15	651	852	No hit	No description
SuperFamily	SSF56112	3.37E-19	672	851	IPR011009	Protein kinase-like domain
Gene3D	G3DSA:1.10.510.10	3.9E-10	713	854	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006468	Biological Process	protein phosphorylation
GO:0004672	Molecular Function	protein kinase activity
GO:0005524	Molecular Function	ATP binding

Sequence ? help Back to Top
Protein Sequence Length: 868 aa Download sequence Send to blast
MGQALQNPVS SPSNLSSPQA HQLITSPDSS SSPSLSTIPS SSAGKEDQVQ QVIRKGKYVS 60 PVWKPDEMLL LAKGWRIQFQ GDDPGSGSSS SFDVEKGRGK NRADKDREVA EFLNKHGVYR 120 DAKTAATKWD NMLGEFRKVY EWERGSERLQ VGKSYFRLSP YERKIHRLPA SFDEQVFKEL 180 SQFMGPKMRH SHIYSPLHHI PNSRSSLPAS LLPPHPSKDD NSSIFVERTR QMHSYLMHNL 240 RNPSLGLEPH SSPLNVGSSI GGGSPRTELR RIGRAKMTWE EWVSLWAEEG EYHKGRVKVQ 300 GSSFLNVDEL LYLDDSMVAS SLEAFGEGQL KGFSVDRFAP EQQLKVFGRR KLTSFSPPSP 360 PLPSSDLNER ILIAMAAESS MRWEFQDPTE YYLGCLRAPP ATPPTLPELS WYVQEPPPKE 420 FRLPLRKDIY RDLPQGRELF FTTSLNEPLD CKAFTIDILS SLIRSIPSLT TSTSSNRDSY 480 IALWDDCINR VISKFCPFEM MFIRKQSFKS FSSESIQEQW PNLTGMVKNL CLWRGEETDQ 540 LRESQSFIVP SSSITKKISW TYNGIPYVLG YYAIGHNITF CALSPSSLSS SSQDTQITRT 600 DVYSLDLSNP SERIKLLVPC WRIGILLATL AEKCVKNGCH SDYERQDLGV GNINEMTPKT 660 TTRFYPNKQR WQTTKEIYSV LHQRVVPHVE QLISYDEDEL ALVFKPRGVK TKPKNMEQLV 720 LALKQVAKAL VALHDLSFMH RDLSWDKVLL VIDMDVEAKE WFVTGFEEAV GAPQINPVVA 780 VAVAEDREKY APEMVRGVHG VKVDVWGIGC LIKTSEVRYE GLVGKQVKEL EQKCMEINPE 840 QRPTAADCYH HLLQIQLSLS SVASICCS

Sequence ? help Back to Top

Protein Sequence Length: 868 aa Download sequence Send to blast

MGQALQNPVS SPSNLSSPQA HQLITSPDSS SSPSLSTIPS SSAGKEDQVQ QVIRKGKYVS  60
PVWKPDEMLL LAKGWRIQFQ GDDPGSGSSS SFDVEKGRGK NRADKDREVA EFLNKHGVYR  120
DAKTAATKWD NMLGEFRKVY EWERGSERLQ VGKSYFRLSP YERKIHRLPA SFDEQVFKEL  180
SQFMGPKMRH SHIYSPLHHI PNSRSSLPAS LLPPHPSKDD NSSIFVERTR QMHSYLMHNL  240
RNPSLGLEPH SSPLNVGSSI GGGSPRTELR RIGRAKMTWE EWVSLWAEEG EYHKGRVKVQ  300
GSSFLNVDEL LYLDDSMVAS SLEAFGEGQL KGFSVDRFAP EQQLKVFGRR KLTSFSPPSP  360
PLPSSDLNER ILIAMAAESS MRWEFQDPTE YYLGCLRAPP ATPPTLPELS WYVQEPPPKE  420
FRLPLRKDIY RDLPQGRELF FTTSLNEPLD CKAFTIDILS SLIRSIPSLT TSTSSNRDSY  480
IALWDDCINR VISKFCPFEM MFIRKQSFKS FSSESIQEQW PNLTGMVKNL CLWRGEETDQ  540
LRESQSFIVP SSSITKKISW TYNGIPYVLG YYAIGHNITF CALSPSSLSS SSQDTQITRT  600
DVYSLDLSNP SERIKLLVPC WRIGILLATL AEKCVKNGCH SDYERQDLGV GNINEMTPKT  660
TTRFYPNKQR WQTTKEIYSV LHQRVVPHVE QLISYDEDEL ALVFKPRGVK TKPKNMEQLV  720
LALKQVAKAL VALHDLSFMH RDLSWDKVLL VIDMDVEAKE WFVTGFEEAV GAPQINPVVA  780
VAVAEDREKY APEMVRGVHG VKVDVWGIGC LIKTSEVRYE GLVGKQVKEL EQKCMEINPE  840
QRPTAADCYH HLLQIQLSLS SVASICCS

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010685327.1	0.0	PREDICTED: uncharacterized protein LOC104899764 isoform X1
TrEMBL	A0A0J8BFY7	0.0	A0A0J8BFY7_BETVU; Uncharacterized protein
STRING	XP_010685327.1	0.0	(Beta vulgaris)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35640.1	8e-07	Trihelix family protein