PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Bv7_156860_hqwy.t1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta
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Family | WRKY | ||||||||
Protein Properties | Length: 327aa MW: 37391.9 Da PI: 6.4111 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 77.3 | 1.8e-24 | 121 | 181 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 dDgy+WrKYGqKe+ ++++pr+YYrCt++ +C+++k+v++ +e+p+ +i+Y+g+H+++ Bv7_156860_hqwy.t1 121 DDGYAWRKYGQKEILNTKYPRNYYRCTHKhdqECQATKQVQQISENPNKYNIIYHGTHTCK 181 8***************************99999**************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 2.4E-24 | 110 | 182 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 3.27E-23 | 114 | 181 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 19.589 | 115 | 178 | IPR003657 | WRKY domain |
SMART | SM00774 | 1.0E-34 | 120 | 182 | IPR003657 | WRKY domain |
Pfam | PF03106 | 7.3E-24 | 121 | 181 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 327 aa Download sequence Send to blast |
MKQGQESAQQ IRSFFHGKLG LLKVEDDIVC DDNNHHQNDV NHHSLVTLES FEKCLNLLKT 60 YDFDHQSYDL NRKRKISSIH DLKCPKSEDI SGGTLPKERR GSYKRRRTGQ SWTVEATNLT 120 DDGYAWRKYG QKEILNTKYP RNYYRCTHKH DQECQATKQV QQISENPNKY NIIYHGTHTC 180 KNHHNNPTII MESPEENSSI FLSFETNNYT TAKHGLNTSL FPSSTTNTTT IKQEYTSIKV 240 DSPCGPHDLD HQLSGTHNQY SSSSDVPSCS DLTSTGLSST PVSDQSDVIS STEIYSSTPT 300 SCDIGQDYAH LFFEEYYTNL EELFSYP |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
6ir8_A | 9e-21 | 113 | 181 | 2 | 69 | OsWRKY45 |
Search in ModeBase |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010683475.1 | 0.0 | PREDICTED: probable WRKY transcription factor 62 | ||||
TrEMBL | A0A0K9QFD5 | 1e-113 | A0A0K9QFD5_SPIOL; Uncharacterized protein | ||||
STRING | XP_010683475.1 | 0.0 | (Beta vulgaris) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G56400.1 | 2e-29 | WRKY DNA-binding protein 70 |