PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Bv6_140280_ckch.t1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta
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Family | bZIP | ||||||||
Protein Properties | Length: 169aa MW: 20087.5 Da PI: 6.5159 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 45 | 2.4e-14 | 76 | 134 | 5 | 63 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 ++ rr+ +NRe+ArrsR RKk +i eL v L +eN+aL+++le+ ++ ++ +e+ Bv6_140280_ckch.t1 76 RKHRRMLSNRESARRSRMRKKRQINELWSHVLRLRTENHALIDKLEHVSESHNQVLQEN 134 689**********************************************9999999887 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 2.5E-11 | 66 | 128 | No hit | No description |
SMART | SM00338 | 1.4E-13 | 72 | 136 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.714 | 74 | 137 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 2.2E-12 | 76 | 134 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 3.78E-11 | 76 | 126 | No hit | No description |
CDD | cd14702 | 5.92E-14 | 77 | 128 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 79 | 94 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 169 aa Download sequence Send to blast |
MPIAMNICKI EEDNHKAFSI QNPLFPSNFS LNFDNLTCNQ TFLDVEEINF GAQYLSYISS 60 TSNEAEEQPK NQVDERKHRR MLSNRESARR SRMRKKRQIN ELWSHVLRLR TENHALIDKL 120 EHVSESHNQV LQENIQLKEE TSNLRQMLTY MKLDTNDVLY NALRYVEDN |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor involved in somatic embryogenesis. Acts as positive regulator of BHLH109. {ECO:0000269|PubMed:26973252}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010681298.2 | 1e-122 | PREDICTED: basic leucine zipper 43 | ||||
Swissprot | Q9FMC2 | 4e-33 | BZP43_ARATH; Basic leucine zipper 43 | ||||
TrEMBL | A0A0J8C902 | 1e-121 | A0A0J8C902_BETVU; Uncharacterized protein | ||||
STRING | XP_010681298.1 | 1e-122 | (Beta vulgaris) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G30530.1 | 7e-37 | basic leucine-zipper 42 |
Publications ? help Back to Top | |||
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