PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Bv6_129360_qxwi.t1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta
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Family | bZIP | ||||||||
Protein Properties | Length: 180aa MW: 20241 Da PI: 5.247 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 36.6 | 1e-11 | 31 | 91 | 3 | 63 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 +l++ +r+++NRe+ArrsR RK++ ++ L+ e++a+N + + ++ ++++ +++e+ Bv6_129360_qxwi.t1 31 DLRKRKRMESNRESARRSRIRKQKHMDDLRAQTIEIKAQNNKILTTTNSTTQHYLDVEAEN 91 58999***********************************999999999998888777665 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 3.7E-10 | 22 | 113 | No hit | No description |
SMART | SM00338 | 6.8E-15 | 29 | 93 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.599 | 31 | 94 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 1.4E-8 | 32 | 83 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 5.47E-10 | 33 | 84 | No hit | No description |
CDD | cd14702 | 2.52E-16 | 34 | 84 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 36 | 51 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 180 aa Download sequence Send to blast |
MASSSSSSQQ HVITPNNSSS GSEADPQQMM DLRKRKRMES NRESARRSRI RKQKHMDDLR 60 AQTIEIKAQN NKILTTTNST TQHYLDVEAE NSVLRAQLAE LGNRLQSLNN IISCLTTTNT 120 NTNTNTNTNN NGNNNYNSEC DDQESFGSFD LEFDDGFSMN SWGFSFANYP IVSTSDAFMC |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 32 | 53 | RKRKRMESNRESARRSRIRKQK |
2 | 45 | 52 | RRSRIRKQ |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010679785.1 | 1e-131 | PREDICTED: bZIP transcription factor 11 | ||||
TrEMBL | A0A0K9QG84 | 4e-51 | A0A0K9QG84_SPIOL; Uncharacterized protein | ||||
STRING | XP_010679785.1 | 1e-130 | (Beta vulgaris) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G75390.1 | 1e-35 | basic leucine-zipper 44 |