PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bv6_128410_fmnu.t1
Organism
Beta vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta
Family bZIP
Protein Properties Length: 289aa    MW: 32878.4 Da    PI: 8.3796
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bv6_128410_fmnu.t1genomeTBVRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_121.84.1e-07181224551
                         CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkelee 51 
                         ++ +r+ +NRe+A+rsR RK+  +e+L++ + eL+ + ++   + ++
  Bv6_128410_fmnu.t1 181 RKRKRMKSNRESAKRSRMRKQRHLENLRNNANELKIQTRE---RSNH 224
                         56789999**************************988753...3333 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003380.0064177248IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.37179242IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1704.4E-4179243No hitNo description
SuperFamilySSF579592.65E-6181234No hitNo description
CDDcd147021.98E-14182231No hitNo description
PROSITE patternPS000360184199IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 289 aa     Download sequence    Send to blast
MLSAVLPSES LLSNGNNNPL FAFSGGFTPW ENLESFFTSN DHKDNDQSKP KLGCYHADFG  60
LGSESPNLTR YHVNFDLGLE SQNKMSPCFD ESNLSRYHAF SESPNQKSPC FDETNLDRYH  120
VGSDLGLDSP NQKSPCFGEI SPDDNRLDKN SLLTLSSSSS GSDDPSPNRN GSSSKTCIDE  180
RKRKRMKSNR ESAKRSRMRK QRHLENLRNN ANELKIQTRE RSNHLRLINQ QIQFISIEND  240
RLKTESIILQ RKLLQLGQIW QYQQLQRQCS NHHPSLQSAS SIAAMQIIN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1193198KRSRMR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010679668.10.0PREDICTED: light-inducible protein CPRF2
STRINGXP_010679668.10.0(Beta vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37730.13e-20basic leucine-zipper 7