PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bv5_099120_wmfg.t2
Organism
Beta vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta
Family WRKY
Protein Properties Length: 325aa    MW: 36363.5 Da    PI: 5.5404
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bv5_099120_wmfg.t2genomeTBVRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY28.62.8e-091251543059
                         TT---EEEEEE-SSSTTEEEEEEES--SS- CS
                WRKY  30 agCpvkkkversaedpkvveitYegeHnhe 59 
                         +gC ++k+v+r++edp +++itY+g+H+++
  Bv5_099120_wmfg.t2 125 QGCYATKQVQRNDEDPMLFDITYKGTHTCT 154
                         59**************************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM007747.6E-5121155IPR003657WRKY domain
PfamPF031062.1E-8123153IPR003657WRKY domain
SuperFamilySSF1182901.7E-7125155IPR003657WRKY domain
Gene3DG3DSA:2.20.25.802.7E-8125154IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 325 aa     Download sequence    Send to blast
MKMELNAGRN YEQHSLAGEL TEGIELAKRL KAHMSTEVHA KETKGMLAER IYSCFQNALV  60
ILNMSGLMEQ SHQHVVPSST MPESPLSVIG SPKSEDINPA SYTQQDDRDL SKKRKMMPTW  120
TEQLQGCYAT KQVQRNDEDP MLFDITYKGT HTCTLAPRSK SAPTSPQKKA YNKQSHAPIT  180
VYHHQPDMLL NFQTGLRVDI QNLENQETGF LFPTQGFGSE NLGFTPSSTL KDSYPYNNIT  240
QSFIQSPATS ESTYFSTSPC NMSSFGGVHY GQHSESEIPD IISATTSGAN SPMIDIDFTL  300
NQWECYPNFV SDNQAFPTNF SEPKE
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010676319.10.0PREDICTED: probable WRKY transcription factor 41
TrEMBLA0A0K9RJ401e-148A0A0K9RJ40_SPIOL; Uncharacterized protein
STRINGXP_010676319.10.0(Beta vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11070.12e-24WRKY family protein