PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Bv4_096120_faoj.t1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta
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Family | EIL | ||||||||
Protein Properties | Length: 698aa MW: 77321.5 Da PI: 5.4505 | ||||||||
Description | EIL family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | EIN3 | 520.7 | 6.2e-159 | 50 | 433 | 1 | 353 |
XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS EIN3 1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsL 91 +el++rmw+d+mllk+lke++k++ ke ++a+k+++s+eqarrkkmsraQDgiLkYMlk+mevc+aqGfvYgiipekgkpv+gasd+L Bv4_096120_faoj.t1 50 DELERRMWRDRMLLKKLKEQSKDKA--KEG-VDAAKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVSGASDNL 137 79*********************65..888.************************************************************ PP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHH CS EIN3 92 raWWkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwg 182 raWWkekv+fdrngpaai+kyqa++ i++ ++++++ s++h+l+elqDTtlgSLLsalmqhcdppqrrfplekgv+pPWWPtG e+ww+ Bv4_096120_faoj.t1 138 RAWWKEKVRFDRNGPAAIAKYQADHSIPGINEDCNA-MASTPHTLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGVPPPWWPTGIEEWWP 227 **********************************88.99**************************************************** PP HHT--TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXX..XXXXXXXX CS EIN3 183 elglskdqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsah..ssslrkqs 271 +lgl+kdqg+ppykkphdlkkawkvsvLtavikhmsp+i++ir+l+rqsk+lqdkm+akes+++l+++nqee++++++ ++ ++ +s Bv4_096120_faoj.t1 228 QLGLPKDQGAPPYKKPHDLKKAWKVSVLTAVIKHMSPDIAKIRKLVRQSKCLQDKMTAKESATWLAIINQEEALARRLFPDrcPPPNAGGS 318 *********************************************************************************87667788** PP XXXXXXXXXXXXXXXXXXXX.XXXXXXXXXX..................................XXXXXXXXXXXXXXXXXXXXX..... CS EIN3 272 pkvtlsceqkedvegkkeskikhvqavktta..................................gfpvvrkrkkkpsesakvsskevsrt 328 ++++s+++++dveg + ++v +k ++ + ++ +krk+++s s v+++++ Bv4_096120_faoj.t1 319 GSLVISDSSDYDVEGVDTDPNSEVDDNKPQNinlfnfgvgaerekfmtpnpmltsaikgevidanTSEFSEKRKQPSSGSHLVMDQKI-FV 408 **************766666699999999999********************************9999******99999999999986.** PP .XXXXXXX.XXXXXXXXXXXXXXXX CS EIN3 329 cqssqfrgsetelifadknsisqne 353 c+ q+++s+++l+f d+ns+++++ Bv4_096120_faoj.t1 409 CEYPQCPYSDSRLGFLDRNSRNNHQ 433 ***********************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04873 | 9.1E-132 | 50 | 299 | No hit | No description |
Gene3D | G3DSA:1.10.3180.10 | 2.2E-75 | 172 | 309 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
SuperFamily | SSF116768 | 1.96E-61 | 178 | 302 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0001666 | Biological Process | response to hypoxia | ||||
GO:0009873 | Biological Process | ethylene-activated signaling pathway | ||||
GO:0042742 | Biological Process | defense response to bacterium | ||||
GO:0071281 | Biological Process | cellular response to iron ion | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0000976 | Molecular Function | transcription regulatory region sequence-specific DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 698 aa Download sequence Send to blast |
MGYFEDMGFC SNFDFFAPPP SMAGEGEVGR EAEAEAAVDE EYSDDEVDVD ELERRMWRDR 60 MLLKKLKEQS KDKAKEGVDA AKQRQSQEQA RRKKMSRAQD GILKYMLKMM EVCKAQGFVY 120 GIIPEKGKPV SGASDNLRAW WKEKVRFDRN GPAAIAKYQA DHSIPGINED CNAMASTPHT 180 LQELQDTTLG SLLSALMQHC DPPQRRFPLE KGVPPPWWPT GIEEWWPQLG LPKDQGAPPY 240 KKPHDLKKAW KVSVLTAVIK HMSPDIAKIR KLVRQSKCLQ DKMTAKESAT WLAIINQEEA 300 LARRLFPDRC PPPNAGGSGS LVISDSSDYD VEGVDTDPNS EVDDNKPQNI NLFNFGVGAE 360 REKFMTPNPM LTSAIKGEVI DANTSEFSEK RKQPSSGSHL VMDQKIFVCE YPQCPYSDSR 420 LGFLDRNSRN NHQLNCAYRF SPSTHGVGAT NFQGNSIEAA NFPTSFAQPE KLSLQSENQS 480 STTFSTSGLG LPEDGQKLIT NLMSVYDNTL HQNKNVNLGS GNFAENNQIG GGFACQQGAL 540 FGNSASQGMN INTMKDHNQA QPKVSQFQLD NGFLGQGMPM NVNNNPQQKL QFQMGSSVFQ 600 GTNMNPPEQK VQLAMDTSFN GQRTVSGANV VTQGTNMSGS VFQSNAIQLD HGRAFDSSSF 660 GMTLNDNMSD FGFGGVPFNL STIDFDQLSR QDNSIWNL |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
4zds_A | 4e-83 | 176 | 308 | 1 | 133 | Protein ETHYLENE INSENSITIVE 3 |
4zds_B | 4e-83 | 176 | 308 | 1 | 133 | Protein ETHYLENE INSENSITIVE 3 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor acting as a positive regulator in the ethylene response pathway. Is required for ethylene responsiveness in adult plant tissues. Binds a primary ethylene response element present in the ETHYLENE-RESPONSE-FACTOR1 promoter with consequence to activate the transcription of this gene. {ECO:0000269|PubMed:9215635, ECO:0000269|PubMed:9851977}. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00367 | DAP | Transfer from AT3G20770 | Download |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010694878.1 | 0.0 | PREDICTED: ETHYLENE INSENSITIVE 3-like 1 protein | ||||
Swissprot | O24606 | 0.0 | EIN3_ARATH; Protein ETHYLENE INSENSITIVE 3 | ||||
TrEMBL | A0A0J8E4K4 | 0.0 | A0A0J8E4K4_BETVU; Uncharacterized protein | ||||
STRING | XP_010694878.1 | 0.0 | (Beta vulgaris) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G20770.1 | 0.0 | EIL family protein |