PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bv4_086160_cqyx.t2
Organism
Beta vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta
Family bZIP
Protein Properties Length: 353aa    MW: 38594.4 Da    PI: 6.0441
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bv4_086160_cqyx.t2genomeTBVRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_132.22.3e-10224265950
                         CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   9 rkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 
                         r   NR +A+rsR RK+++i eLe+ v +L++e +aL  ++ 
  Bv4_086160_cqyx.t2 224 RILANRQSAQRSRVRKLQYISELERSVTTLQTEVSALSPRVA 265
                         6678*****************************999987765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003387.6E-13215280IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.76218270IPR004827Basic-leucine zipper domain
CDDcd147034.04E-23220271No hitNo description
PfamPF001702.6E-8222264IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.97E-10222272No hitNo description
Gene3DG3DSA:1.20.5.1701.5E-12222271No hitNo description
PROSITE patternPS000360224238IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 353 aa     Download sequence    Send to blast
MAQLPPKIPS LPHQNWPPAF PPHQRMPPLT NNISPPPTQP PQPPSSTAAN QSWVDEFLDF  60
TTTRRVTHRR SMSDSVTFLE GPHLVDECRN SGGGGGGGGG GGGGGGGGFD RLDDEQLMSM  120
FSDDISAAMV GPPSSPSDQN SNNDEENPMS TDNNNTNSNV NNDGQPQQQQ QLVQCFPKSE  180
PGEVESACHS NPDNNNQISA LPSDNANNQS AGDGTIDPKR VKSRILANRQ SAQRSRVRKL  240
QYISELERSV TTLQTEVSAL SPRVAFLDHQ RLILNVDNSA LKQRIAALAQ DKIFKDAHQE  300
ALKKEIERLR QIYQHQQQNM KKMNNNSNNV AATGTTQASD HNMGFTDKEQ LMT
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator. {ECO:0000269|PubMed:17719007}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010675419.10.0PREDICTED: basic leucine zipper 34 isoform X1
SwissprotQ9M2K43e-93BZP61_ARATH; Basic leucine zipper 61
TrEMBLA0A0K9RCG51e-132A0A0K9RCG5_SPIOL; Uncharacterized protein
STRINGXP_010675419.10.0(Beta vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58120.11e-58bZIP family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Gibalová A, et al.
    Characterization of pollen-expressed bZIP protein interactions and the role of ATbZIP18 in the male gametophyte.
    Plant Reprod, 2017. 30(1): p. 1-17
    [PMID:27896439]
  3. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]