PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Bv4_082370_uwpu.t1

Organism

Beta vulgaris

Taxonomic ID

161934

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta

Family

GeBP

Protein Properties

Length: 482aa MW: 51867.4 Da PI: 4.8106

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Bv4_082370_uwpu.t1	genome	TBVR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	117.8	5.9e-37	119	217	2	97
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgk...spsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkif 89 lfqrlw++eDei lLqG++++++++g+ ++d+ afy+++k++++++++k+qlveK+rrLKkK+++ +k++sgk+++f+++hdq +f Bv4_082370_uwpu.t1 119 LFQRLWTDEDEIELLQGFLEYTSSRGTtssGHHHDTAAFYDQIKSKLQLEFNKNQLVEKLRRLKKKYRNVLSKMSSGKDFVFKSPHDQATF 209 79**********************97644566***************************************************** PP DUF573 90 elskkiWg 97 e+s+kiW Bv4_082370_uwpu.t1 210 EISRKIWT 217 *****6 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF04504	3.7E-35	120	216	IPR007592	Protein of unknown function DUF573

Sequence ? help Back to Top
Protein Sequence Length: 482 aa Download sequence Send to blast
MAFEVEPHPP FNDDDFDDDD DDSEPLNGAV PDDDVAGDSD SSSAGDSVIA GDVEADSTAV 60 TVAIPSSSIS VAVSVPPPSS VNAVTIALPD PKRHRIDPLV SSSLIVTPEK KPIDDSRRLF 120 QRLWTDEDEI ELLQGFLEYT SSRGTTSSGH HHDTAAFYDQ IKSKLQLEFN KNQLVEKLRR 180 LKKKYRNVLS KMSSGKDFVF KSPHDQATFE ISRKIWTNLS PNFRGVVEFD DDDQNPNPNP 240 NSVLAAGTPP RPPNSSFVIS HINLNSAAGG STPMMVDHKA GSTGSYNNNN NNSINSNAVG 300 FDIMMSNLNS PAAKLSSRKR PRVKVEEKFG RNVSLGGNVG GEGGINVNEN SINHNANNNN 360 NNNTNNISSS NINLGSTMQG LIEEAVRSCL SPLVKDLVSN AVNGTVMAGS GGGGIKGVGA 420 LALNAVPLNF SGPNLVGNNG GDVMDEKWRK QQILELEVYS KRLELVQDQI KLSLEELRSM 480 GS

Sequence ? help Back to Top

Protein Sequence Length: 482 aa Download sequence Send to blast

MAFEVEPHPP FNDDDFDDDD DDSEPLNGAV PDDDVAGDSD SSSAGDSVIA GDVEADSTAV  60
TVAIPSSSIS VAVSVPPPSS VNAVTIALPD PKRHRIDPLV SSSLIVTPEK KPIDDSRRLF  120
QRLWTDEDEI ELLQGFLEYT SSRGTTSSGH HHDTAAFYDQ IKSKLQLEFN KNQLVEKLRR  180
LKKKYRNVLS KMSSGKDFVF KSPHDQATFE ISRKIWTNLS PNFRGVVEFD DDDQNPNPNP  240
NSVLAAGTPP RPPNSSFVIS HINLNSAAGG STPMMVDHKA GSTGSYNNNN NNSINSNAVG  300
FDIMMSNLNS PAAKLSSRKR PRVKVEEKFG RNVSLGGNVG GEGGINVNEN SINHNANNNN  360
NNNTNNISSS NINLGSTMQG LIEEAVRSCL SPLVKDLVSN AVNGTVMAGS GGGGIKGVGA  420
LALNAVPLNF SGPNLVGNNG GDVMDEKWRK QQILELEVYS KRLELVQDQI KLSLEELRSM  480
GS

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010674885.1	0.0	PREDICTED: probable transcription factor At3g04930 isoform X1
Swissprot	Q9CAV7	3e-57	STKLJ_ARATH; Probable transcription factor At3g04930
TrEMBL	A0A0K9S386	0.0	A0A0K9S386_SPIOL; Uncharacterized protein
STRING	XP_010674885.1	0.0	(Beta vulgaris)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04930.2	1e-49	DNA-binding storekeeper protein-related transcriptional regulator