PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bv3_060650_iwdw.t1
Organism
Beta vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta
Family bZIP
Protein Properties Length: 577aa    MW: 63771.9 Da    PI: 7.6343
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bv3_060650_iwdw.t1genomeTBVRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_132.61.7e-10287326541
                         CHHHCHHHHHHHHHHHHHHHHHHHHHHHH...HHHHHHHH CS
              bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLee...kvkeLeae 41 
                         k  rr+++NReAAr+sR+RKka++++Le    + ++Le+e
  Bv3_060650_iwdw.t1 287 KTLRRLAQNREAARKSRLRKKAYVQQLESsriRLAQLEQE 326
                         7789***********************9632255555554 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1705.0E-8280330No hitNo description
SMARTSM003381.3E-7283375IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.22285329IPR004827Basic-leucine zipper domain
PfamPF001709.1E-8287325IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.44E-6287329No hitNo description
PROSITE patternPS000360290305IPR004827Basic-leucine zipper domain
PfamPF141443.8E-31377450IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 577 aa     Download sequence    Send to blast
MGFLGGVDGV ASQQEMKQLL TSGVVHPFMA TTTTNHTIHS HSNNNSNSNS NTNNDPHLDL  60
QQFSLLHHQH QQQQQLQQQQ QHHHQHQHHS SQSQQQQQQQ NISFSMMQSS PSSSSLPGNN  120
NNFIGGGKES SSTGAYDLGE LDQALFLYLD GQTDHEQQRQ NHNSSSSSPP RGVGLGGGGG  180
GGGMRPPTLN IFPSQPMHVE PSTKTSPGGV GVGGEGGGQS TSGGSKRPSE QPPAIELSNN  240
NKNNNNNKNK NQHDVAAEQS KSIKREGNRK GPTSSSEQEG PKTPDPKTLR RLAQNREAAR  300
KSRLRKKAYV QQLESSRIRL AQLEQELQRA RAQGIFFGGG LGGADQGIPV GVSNISSDAA  360
VFDLEYTRWL EENHRLTCEL RAAVQEHIPE SELKLYVDNC LAHYDVVMNL KSMVAKTDVF  420
HLVSGMWKTP AERCFMWMGG FRPSELIKII LHQIEPLSDQ QLMSMCGLQQ STQEAEEALS  480
QGLEALQQSL SDVIASDTLS CPPNMTNYMG QMALAMNKLS TMENFVRQAD SLRHQTFHRL  540
HQILTTRQAA RCFLTIAEYF HRLRALSSLW MARPRQD
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds to as1-like elements (5'-TGACGTAAgggaTGACGCA-3') in promoters of target genes. Regulates transcription in response to plant signaling molecules salicylic acid (SA), methyl jasmonate (MJ) and auxin (2,4D) only in leaves. Prevents lateral branching and may repress defense signaling. {ECO:0000269|PubMed:12777042}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00491DAPTransfer from AT5G06839Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010672705.10.0PREDICTED: transcription factor TGA2.1
SwissprotQ52MZ20.0TGA10_TOBAC; bZIP transcription factor TGA10
TrEMBLA0A0K9QYT40.0A0A0K9QYT4_SPIOL; Uncharacterized protein
STRINGXP_010672705.10.0(Beta vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06839.31e-169bZIP family protein