PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Bv3_053880_mpkc.t1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta
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Family | bZIP | ||||||||
Protein Properties | Length: 169aa MW: 18891.2 Da PI: 8.8886 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 45.6 | 1.6e-14 | 33 | 82 | 4 | 53 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelk 53 k+ rr+++NRe+ArrsRq+K++ ++ L ++v +L+ eN++ k++ e + Bv3_053880_mpkc.t1 33 EKKRRRMESNRESARRSRQKKQQHLDDLIREVSNLTRENEEIGKKIGEVS 82 6999************************************9999998876 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 2.4E-18 | 30 | 94 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 1.3E-13 | 31 | 80 | No hit | No description |
PROSITE profile | PS50217 | 11.22 | 32 | 82 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 4.3E-12 | 34 | 82 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 4.44E-12 | 34 | 82 | No hit | No description |
CDD | cd14702 | 3.32E-17 | 35 | 82 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 37 | 52 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 169 aa Download sequence Send to blast |
MPPLMNTNEV KNTSVALPTR SSGSSEGGFS SDEKKRRRME SNRESARRSR QKKQQHLDDL 60 IREVSNLTRE NEEIGKKIGE VSGIFDTIDA QNKVLVNHKD KLSARLESLE SIIEIAKVVR 120 SSSSSSGNNN NNNGECLYEL NSDPMMKPWQ LPCPSMPIFA SSGVNCFKF |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 46 | 52 | RRSRQKK |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010671685.1 | 1e-121 | PREDICTED: bZIP transcription factor 53 | ||||
TrEMBL | A0A0K9RUV9 | 2e-32 | A0A0K9RUV9_SPIOL; Uncharacterized protein | ||||
STRING | XP_010671685.1 | 1e-121 | (Beta vulgaris) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G62420.1 | 9e-24 | basic region/leucine zipper motif 53 |