PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Bv2_047470_qmgy.t1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta
|
||||||||
Family | NAC | ||||||||
Protein Properties | Length: 228aa MW: 26439.5 Da PI: 8.034 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 71.5 | 2.3e-22 | 7 | 137 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeek...ewyfFskrdkkyatgkrknr.atksgyWkatgk 88 p G+rF Pt +e + +yLk+k+ g l+ ++ ++ev+iy+++P++L + ++ +++ e yf+++ +k++++g++ nr + k g W + Bv2_047470_qmgy.t1 7 PIGYRFLPTVQETLIKYLKPKIVGGILPQDNPLREVNIYSCHPSELFNDLEDNDEdeiERYFYTTLKKANESGRNYNRkINKVGKWDGEYQ 97 89***************************899**************75444433333578******************66678***98766 PP NAM 89 dkevlskkgelvglkktLvfykgrapkgekt.dWvmheyrl 128 k++l+ +g+++g k + + + ++ kt +W mhey++ Bv2_047470_qmgy.t1 98 -KKILDVHGQVIGFDKYFKYAPIEIQEIDKTmEWKMHEYSI 137 .778888**************777777666648******86 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 1.09E-24 | 4 | 159 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 26.366 | 6 | 161 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.0E-12 | 7 | 137 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 228 aa Download sequence Send to blast |
MTTPRIPIGY RFLPTVQETL IKYLKPKIVG GILPQDNPLR EVNIYSCHPS ELFNDLEDND 60 EDEIERYFYT TLKKANESGR NYNRKINKVG KWDGEYQKKI LDVHGQVIGF DKYFKYAPIE 120 IQEIDKTMEW KMHEYSINPE LLPQGTAEEK KNLVVCRMVM IMKGNKQAKN KTRVIRLGKP 180 QPLSCTNAVP NMMMMHPPQI NYVFTTAEQD IEPTSQTQGD FLLGYLGS |
Regulation -- PlantRegMap ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_010693370.1 | 1e-171 | PREDICTED: NAC domain-containing protein 105 | ||||
TrEMBL | A0A0J8BCT0 | 1e-169 | A0A0J8BCT0_BETVU; Uncharacterized protein | ||||
STRING | XP_010693370.1 | 1e-170 | (Beta vulgaris) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G01520.1 | 7e-11 | NAC domain containing protein 67 |