PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bv1_001500_zhap.t1
Organism
Beta vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta
Family bHLH
Protein Properties Length: 276aa    MW: 29514.7 Da    PI: 7.1156
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bv1_001500_zhap.t1genomeTBVRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH40.93.8e-13212257655
                         HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                 HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                         +++Er RR ri +++ +L+el+P+     +k  + a++Le+AveY+k Lq
  Bv1_001500_zhap.t1 212 SIAERVRRTRISDRIRKLQELVPNM----DKQTNTADMLEEAVEYVKTLQ 257
                         689*********************7....688*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.659206256IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474596.54E-16209269IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000834.92E-13210261No hitNo description
Gene3DG3DSA:4.10.280.103.5E-16211270IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.7E-10212257IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.5E-12212262IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0042335Biological Processcuticle development
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 276 aa     Download sequence    Send to blast
MQEGGGSELT RTSGLARFRS APATWLDALL EDDDPLKLSG PTHQHQGGLT QLLTAGTTTS  60
TGPSSVPSAR PTSASYISPD PGFFEGGGGG GGGGGSGTHQ GGNTVAFQRM NSSPAEFLSA  120
NIDGYFSSFG IPSNYDFVGG GSSVDVTGSG KRLRESDSEQ HSPNFSSQRR GEQSGSLTTA  180
SSLVEMEMEK LLEESVPCRV RAKRGCATHP RSIAERVRRT RISDRIRKLQ ELVPNMDKQT  240
NTADMLEEAV EYVKTLQRQI HDLTEQQKKC KCIAKS
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00181DAPTransfer from AT1G35460Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010682704.10.0PREDICTED: transcription factor bHLH81
SwissprotQ9C8P84e-76BH080_ARATH; Transcription factor bHLH80
TrEMBLA0A0K9QRI51e-143A0A0K9QRI5_SPIOL; Uncharacterized protein
STRINGXP_010682704.10.0(Beta vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G09180.11e-49bHLH family protein