PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bostr.3288s0016.1.p
Organism
Boechera stricta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Boechereae; Boechera
Family EIL
Protein Properties Length: 584aa    MW: 65855.3 Da    PI: 5.263
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bostr.3288s0016.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3437.89.6e-134384001351
                          XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
                 EIN3   1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasds 90 
                          e+l++rmwkd+++lkr+ker+k    ++ a   ++  +++++qa+rkkmsraQDgiLkYMlk mevc+++GfvYgiipekgkpv+g+sd+
  Bostr.3288s0016.1.p  38 EDLERRMWKDRVRLKRIKERQKIG--SQGA-QTKEMPKNISDQAQRKKMSRAQDGILKYMLKLMEVCKVRGFVYGIIPEKGKPVSGSSDN 124
                          89*************999999964..4444.5566789**************************************************** PP

                          XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HH CS
                 EIN3  91 LraWWkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelw 180
                          +raWWkekv+fd+ngpaai+ky+ ++l++++++++    ++++  l++lqD+tlgSLLs+lmqhcdppqr+fplekg++pPWWPtG+e+w
  Bostr.3288s0016.1.p 125 IRAWWKEKVKFDKNGPAAIAKYEEECLAFGKSDGN----RNSQFVLQDLQDATLGSLLSSLMQHCDPPQRKFPLEKGTPPPWWPTGDEEW 210
                          *****************************987777....77999********************************************** PP

                          HHHHT--TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXX...XX.. CS
                 EIN3 181 wgelglskdqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsah...ss.. 265
                          w +lgl+k+q+ ppy+kphdlkk+wkv+vLtavi+hmsp+i++i++++rqsk+lqdkm+akes+++l+vlnqee+++++ s++   s+  
  Bostr.3288s0016.1.p 211 WVKLGLPKSQR-PPYRKPHDLKKMWKVGVLTAVINHMSPDIAKIKRHVRQSKCLQDKMTAKESAIWLAVLNQEESLIQQPSSDngtSNvt 299
                          ***********.9**********************************************************************6542278 PP

                          ...XXXX....XXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXX..........XXXXXXXXXXXXXXXXXXXXX......XXXXXXX.X CS
                 EIN3 266 ...slrk....qspkvtlsceqkedvegkkeskikhvqavktta..........gfpvvrkrkkkpsesakvsskevsrtcqssqfrgse 338
                                +    +++k+++++++++dv+g+++ + + ++++++++          + +v ++ k+++++++k   ++ + + q+++ ++ e
  Bostr.3288s0016.1.p 300 ethR--RgnnaDRRKTVINSDSDYDVDGTEDASGSVSSKDSRRNqiqkeqttaiSHSVRDQDKAEKHRRRKRPRRSGTVNRQEEEQPEAE 387
                          7540..33445888999**********55555545555554444555555555766666666667777777776666777888888999* PP

                          XXXXXXXXXXXXX CS
                 EIN3 339 telifadknsisq 351
                          +++i++d+n+++ 
  Bostr.3288s0016.1.p 388 QRNILPDMNHVDA 400
                          *********9875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048732.5E-12638283No hitNo description
Gene3DG3DSA:1.10.3180.103.4E-71159291IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167681.44E-60164286IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0042762Biological Processregulation of sulfur metabolic process
GO:0071281Biological Processcellular response to iron ion
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 584 aa     Download sequence    Send to blast
MGDLAMTVAD IRMGNEPDDL ASDNVAEIDV SEEEIDAEDL ERRMWKDRVR LKRIKERQKI  60
GSQGAQTKEM PKNISDQAQR KKMSRAQDGI LKYMLKLMEV CKVRGFVYGI IPEKGKPVSG  120
SSDNIRAWWK EKVKFDKNGP AAIAKYEEEC LAFGKSDGNR NSQFVLQDLQ DATLGSLLSS  180
LMQHCDPPQR KFPLEKGTPP PWWPTGDEEW WVKLGLPKSQ RPPYRKPHDL KKMWKVGVLT  240
AVINHMSPDI AKIKRHVRQS KCLQDKMTAK ESAIWLAVLN QEESLIQQPS SDNGTSNVTE  300
THRRGNNADR RKTVINSDSD YDVDGTEDAS GSVSSKDSRR NQIQKEQTTA ISHSVRDQDK  360
AEKHRRRKRP RRSGTVNRQE EEQPEAEQRN ILPDMNHVDA PLLEHNINGT HQEDGVVDPN  420
IALGPEENGL ELVVPEFNNN YTYLPPVNEQ AMMSVGERPM LYGPNPNQEL QFGSGYNFYN  480
PSAVFVHNQD NDILHTQIEM NAQAPTHASG FETQGGVLQP HSLHGNEDGV TGSELPPEYQ  540
SEQDKLLDSN ILSPFNDLAF DSSTLYSGFD SYGFDDDFSW FGA*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wij_A1e-841632949140ETHYLENE-INSENSITIVE3-like 3 protein
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor that may be involved in the ethylene response pathway. {ECO:0000269|PubMed:9215635, ECO:0000269|PubMed:9851977}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00233DAPTransfer from AT1G73730Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapBostr.3288s0016.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3532450.0AK353245.1 Thellungiella halophila mRNA, complete cds, clone: RTFL01-23-B16.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010416192.10.0PREDICTED: ETHYLENE INSENSITIVE 3-like 3 protein isoform X1
RefseqXP_019083346.10.0PREDICTED: ETHYLENE INSENSITIVE 3-like 3 protein isoform X2
RefseqXP_019083347.10.0PREDICTED: ETHYLENE INSENSITIVE 3-like 3 protein isoform X3
SwissprotO231160.0EIL3_ARATH; ETHYLENE INSENSITIVE 3-like 3 protein
TrEMBLR0IA250.0R0IA25_9BRAS; Uncharacterized protein
STRINGBostr.3288s0016.1.p0.0(Boechera stricta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM46582548
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G73730.10.0ETHYLENE-INSENSITIVE3-like 3
Publications ? help Back to Top
  1. Frerigmann H,Gigolashvili T
    Update on the role of R2R3-MYBs in the regulation of glucosinolates upon sulfur deficiency.
    Front Plant Sci, 2014. 5: p. 626
    [PMID:25426131]
  2. Zheng ZL,Zhang B,Leustek T
    Transceptors at the boundary of nutrient transporters and receptors: a new role for Arabidopsis SULTR1;2 in sulfur sensing.
    Front Plant Sci, 2014. 5: p. 710
    [PMID:25566284]
  3. Panda SK,Sunkar R
    Nutrient- and other stress-responsive microRNAs in plants: Role for thiol-based redox signaling.
    Plant Signal Behav, 2015. 10(4): p. e1010916
    [PMID:25912823]
  4. Wawrzyńska A,Sirko A
    EIN3 interferes with the sulfur deficiency signaling in Arabidopsis thaliana through direct interaction with the SLIM1 transcription factor.
    Plant Sci., 2016. 253: p. 50-57
    [PMID:27968996]