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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Brast05G260900.1.p |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
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| Family |
GRAS |
| Protein Properties |
Length: 466aa MW: 49609.6 Da PI: 4.8176 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Brast05G260900.1.p | genome | JGI | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 176.4 | 2.1e-54 | 83 | 462 | 3 | 373 |
GRAS 3 elLlecAeavssgdlelaqalLarlselaspdgd...........pmqRlaayfteALaarlarsvselykalppsetseknsseelaalk 82
lL++ A+av++gd+ a+++L+++ + dg ++ la yf++ L++r+ar + ++ + ++ +++l a++
Brast05G260900.1.p 83 GLLMAGATAVEAGDTVHASEILEKIDSIIVLDGIacgrygtvgssSFDHLACYFARSLRTRIAR------ARTECHPLAP--LASRLPAYQ 165
589*************************999995588899999999******************......4445555543..7889***** PP
GRAS 83 lfsevsPilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelg 173
+++e+sP++kf+h+taNqaIlea+ + vH++D++++ G+QW +L+ La +g +R+T++g ++ + + g+ L++fAe+lg
Brast05G260900.1.p 166 MLQELSPFIKFAHFTANQAILEATMDAPGVHVVDLNVGDGVQWSSLMSDLAR-HGGDKPFRLTALGG-----TTGMAAPGRWLSEFAESLG 250
**************************************************96.6777789******9.....89***************** PP
GRAS 174 vpfefnvlvakrledleleeLrvkpgEalaVnl.vlqlhrlldesvsleserdevLk.lvkslsPkvvvvveqeadh.nse.......... 251
+pf+++ a++l++l +e++ + g +++V++ v + ++++ +++ ++ ++L ++ l+Pk+v+++e e+++ +++
Brast05G260900.1.p 251 LPFRYDE--AEDLHEL-TEMITC-GGSSVIVSCdVTGMSHTPAMDTP---QTLAFLAgVLEVLQPKLVILIEDELSRlGRTmpppplagsa 334
******7..7889999.778865.57777788725556666633333...3557886266789***********99866668999999999 PP
GRAS 252 sFlerflealeyysalfdsl.eaklpreseeri.kvErellgreivnvvacegaerrerhetlekWrer.....leeaGFkpvplsekaak 335
sF+e f+ea ++++a+ +sl + ++ ++r vE+e+lg++i+ va+++ + ++ + +G+++ ++s ++
Brast05G260900.1.p 335 SFVELFSEARRHFTAVQESLaSCFCGAGYKARLgLVEEEILGPSIEGSVAAATWPPHGLVTG-GTNAGPvaaigFPGSGYRTCEMSGFNIV 424
********************4455555557775389****************9984433332.2222220111255688899********* PP
GRAS 336 qaklllrkvksdgyrve.eesgslvlgWkdrpLvsvSaW 373
qak+l ++ +g+ v +++g l l+Wk+rpL+svS+W
Brast05G260900.1.p 425 QAKMLAGLFS-RGFGVLhDKKGRLALCWKGRPLTSVSVW 462
**********.99988736689999************** PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 466 aa
Download sequence Send
to blast |
MEALLSYPCS PLISFPAQHE ESSCLLWPNQ LVFPHENAHI YDADPPGDDR WQAHGAKLIE 60
DDNLAVTSSD SLVMVEDGST LDGLLMAGAT AVEAGDTVHA SEILEKIDSI IVLDGIACGR 120
YGTVGSSSFD HLACYFARSL RTRIARARTE CHPLAPLASR LPAYQMLQEL SPFIKFAHFT 180
ANQAILEATM DAPGVHVVDL NVGDGVQWSS LMSDLARHGG DKPFRLTALG GTTGMAAPGR 240
WLSEFAESLG LPFRYDEAED LHELTEMITC GGSSVIVSCD VTGMSHTPAM DTPQTLAFLA 300
GVLEVLQPKL VILIEDELSR LGRTMPPPPL AGSASFVELF SEARRHFTAV QESLASCFCG 360
AGYKARLGLV EEEILGPSIE GSVAAATWPP HGLVTGGTNA GPVAAIGFPG SGYRTCEMSG 420
FNIVQAKMLA GLFSRGFGVL HDKKGRLALC WKGRPLTSVS VWSPV*
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