PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Brast04G264700.3.p
Organism
Brachypodium stacei
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
Family bZIP
Protein Properties Length: 441aa    MW: 47660.8 Da    PI: 8.2634
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Brast04G264700.3.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_124.94.4e-08159181426
                         XCHHHCHHHHHHHHHHHHHHHHH CS
              bZIP_1   4 lkrerrkqkNReAArrsRqRKka 26 
                          k  rr+++NReAAr+sR+RKk 
  Brast04G264700.3.p 159 AKTLRRLAQNREAARKSRLRKKG 181
                         6889*****************95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1703.4E-6157244No hitNo description
PROSITE patternPS000360163178IPR004827Basic-leucine zipper domain
PfamPF141443.6E-27215297IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 441 aa     Download sequence    Send to blast
MGDRPWQQPH EQLAASCSAH TGMIQASSSA AAISSIHGNI IRKDPGGGYD DMAELDQALF  60
LYLNSQDQTS VQEQPQTLNI FPSRPMHVVV EPSPRTTAAN PAAPNVVAAA GSSKLQTPSR  120
PAPAPGNKAG KAAVKREGSG GGDGTPSTSE QEGPRTPNAK TLRRLAQNRE AARKSRLRKK  180
GAILAGGAGI GGLSPEAAWF DGEHARWVEE HERMMRHLRA AVELDDNHLQ RPDQEEQQLR  240
QMVDAAAAHH VVLAELKSAV ARADVFHLVS GTWLPAAERC FLWIGGSRPS DLIKVVSRHV  300
EPLTEQQVAS VCDVQRWVRE REEALDQELQ AARSSLSDVV CSDALLSPYP DMAAYMAHMS  360
LAIANLSSLE AFVRQADTLR LQMLHRLPQI LTARQAARCF LAVADYSQRL RALSSLWLAR  420
PRQGQGGQPT QPGAGGRIHP *
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds to as1-like elements (5'-TGACGTAAgggaTGACGCA-3') in promoters of target genes. Regulates transcription in response to plant signaling molecules salicylic acid (SA), methyl jasmonate (MJ) and auxin (2,4D) only in leaves. Prevents lateral branching and may repress defense signaling. {ECO:0000269|PubMed:12777042}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapBrast04G264700.3.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003571241.10.0transcription factor TGAL9 isoform X1
SwissprotQ52MZ21e-120TGA10_TOBAC; bZIP transcription factor TGA10
TrEMBLA0A0Q3I0B40.0A0A0Q3I0B4_BRADI; Uncharacterized protein
STRINGPavir.J04905.1.p1e-166(Panicum virgatum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06839.33e-79bZIP family protein