PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Brast04G264700.2.p
Organism
Brachypodium stacei
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
Family bZIP
Protein Properties Length: 466aa    MW: 50658.1 Da    PI: 7.9397
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Brast04G264700.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_134.25.5e-11158188434
                         XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeek 34 
                          k  rr+++NReAAr+sR+RKka+i++Le+ 
  Brast04G264700.2.p 158 AKTLRRLAQNREAARKSRLRKKAYIQNLETS 188
                         6889************************974 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.1E-4155211IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1709.9E-8156201No hitNo description
PROSITE profilePS502178.714157201IPR004827Basic-leucine zipper domain
PfamPF001703.2E-8158199IPR004827Basic-leucine zipper domain
SuperFamilySSF579595.13E-7161203No hitNo description
PROSITE patternPS000360162177IPR004827Basic-leucine zipper domain
PfamPF141443.9E-27240322IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 466 aa     Download sequence    Send to blast
MGDRPWQQPH EQLAASCSAH TGMIQASSSA AAISSIHGNI IKDPGGGYDD MAELDQALFL  60
YLNSQDQTSV QEQPQTLNIF PSRPMHVVVE PSPRTTAANP AAPNVVAAAG SSKLQTPSRP  120
APAPGNKAGK AAVKREGSGG GDGTPSTSEQ EGPRTPNAKT LRRLAQNREA ARKSRLRKKA  180
YIQNLETSRI RLSQMEQEMQ RCNTQGAILA GGAGIGGLSP EAAWFDGEHA RWVEEHERMM  240
RHLRAAVELD DNHLQRPDQE EQQLRQMVDA AAAHHVVLAE LKSAVARADV FHLVSGTWLP  300
AAERCFLWIG GSRPSDLIKV VSRHVEPLTE QQVASVCDVQ RWVREREEAL DQELQAARSS  360
LSDVVCSDAL LSPYPDMAAY MAHMSLAIAN LSSLEAFVRQ ADTLRLQMLH RLPQILTARQ  420
AARCFLAVAD YSQRLRALSS LWLARPRQGQ GGQPTQPGAG GRIHP*
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds to as1-like elements (5'-TGACGTAAgggaTGACGCA-3') in promoters of target genes. Regulates transcription in response to plant signaling molecules salicylic acid (SA), methyl jasmonate (MJ) and auxin (2,4D) only in leaves. Prevents lateral branching and may repress defense signaling. {ECO:0000269|PubMed:12777042}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapBrast04G264700.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010233971.10.0transcription factor TGAL9 isoform X2
SwissprotQ52MZ21e-137TGA10_TOBAC; bZIP transcription factor TGA10
TrEMBLA0A0Q3F6P50.0A0A0Q3F6P5_BRADI; Uncharacterized protein
STRINGPavir.J04905.1.p0.0(Panicum virgatum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06839.31e-93bZIP family protein