PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Brast01G282100.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
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Family | G2-like | ||||||||
Protein Properties | Length: 249aa MW: 27940.8 Da PI: 9.0562 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 54.1 | 3.5e-17 | 200 | 249 | 1 | 51 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ 51 k+rl+Wt+eLH++Fv+a ++L ++ +Pk+il+lm+ + L++e+++SHLQ Brast01G282100.1.p 200 KARLVWTEELHNSFVNAYNKL-LPKDRVPKKILKLMNDPRLSRENIASHLQ 249 68*******************.88889***********************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF52172 | 7.8E-5 | 25 | 92 | IPR011006 | CheY-like superfamily |
Gene3D | G3DSA:1.10.10.60 | 1.1E-18 | 197 | 249 | IPR009057 | Homeodomain-like |
SuperFamily | SSF46689 | 1.24E-11 | 198 | 249 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 6.5E-16 | 200 | 249 | IPR006447 | Myb domain, plants |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 249 aa Download sequence Send to blast |
MDHVPPAAPG AGGHIPLPLL MHPCPRALVV SGDASRLQAM ETGLRQEGYK EVETYPDPTM 60 AMAMRRGRYE LVMVDMFPLR ADAFDLLECA ISEMNAEAHA LSKVGDKYEK LSIQDLETIR 120 KTIKFNKSTS PEGTPNHDNN SPTSTVSTTT TTTTTTGSSS GRRVPGRKMI QQHGMKSQEV 180 EQDREHTEDQ RQQLTHKSKK ARLVWTEELH NSFVNAYNKL LPKDRVPKKI LKLMNDPRLS 240 RENIASHLQ |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Brast01G282100.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010233072.3 | 1e-143 | two-component response regulator ARR14 | ||||
TrEMBL | A0A2K2D843 | 1e-143 | A0A2K2D843_BRADI; Uncharacterized protein | ||||
STRING | BRADI2G11400.1 | 1e-84 | (Brachypodium distachyon) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP20891 | 4 | 5 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G01760.1 | 5e-16 | response regulator 14 |
Link Out ? help Back to Top | |
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Phytozome | Brast01G282100.1.p |